Prunus mume (Japanese apricot): 103322812
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Entry
103322812 CDS
T03196
Name
(RefSeq) E3 ubiquitin-protein ligase RHF1A
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103322812
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103322812
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103322812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_5
zf-C3HC4_4
zf-Nse
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
103322812
NCBI-ProteinID:
XP_008222975
LinkDB
All DBs
Position
LG2:30068296..30071843
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AA seq
386 aa
AA seq
DB search
MASFAPSSSLNPKPVSALSFSSPDVVDDSYEDSCSICLEPFNCDDPATITSCKHEYHLHC
ILEWSQRSKECPICWQLLVLKDPACQGLLDAVQNERRSRSRKISSMAPQAFQHSYEDFDV
EHDSFSDDSDLDERIMQHLAAASSRARYIRRREKQRSSGLGPSHVFIFSPHENGSGMQQT
YPTSPEECQSYGSPRGDSPTSQRPPVIQPPPSFICSTAANSDVPYKPRVLYGQSSPDGPR
RQSPSEMINLPDSIKSKLSAASARYKESISRSTRGFKEKLVARNNSVKELSKGVQREMSA
GIAGVARMFERLDLTPKKPGAPTPVSGCNGGTSNFKGKGVLENVIVQSCNKSSGRIADES
SDGPSHITVAAPGRVGVEVSSAQSEH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcctctttcgctccctcttcttctctgaatccgaaacccgtttcagctctatctttt
tcttctccagatgttgttgatgacagctatgaagactcctgcagtatctgccttgagcct
ttcaactgcgatgacccagccactattaccagctgcaaacatgaatatcatcttcactgt
attttagaatggtcacaaagaagtaaagaatgcccaatttgttggcagttacttgtcttg
aaggatcctgcttgtcaagggcttctagatgctgtacaaaatgagaggcgctcaaggtcc
agaaaaatatcttccatggccccccaggcttttcaacattcctatgaggactttgatgtt
gagcacgactctttctcagatgactctgatttggatgagcgtattatgcagcatcttgct
gctgcttcaagcagagctcgttacattcgcagacgggaaaaacagagatcttctggccta
ggtccttcccatgtttttattttctcccctcatgaaaatgggagtggtatgcagcaaaca
tacccaacgtctccagaagaatgccaaagttatgggtcacccagaggtgattcacctact
tctcaaaggccacctgttattcaacctccaccatcttttatctgcagcactgccgccaat
agtgatgtcccttacaaaccaagagtgctttatggccagtcatcacctgatggtccacgc
agacaaagcccatctgagatgatcaatttgcctgattctatcaaatccaagttgtctgct
gcctcagccagatacaaagagtcaatctctagaagcactcgaggctttaaggagaagcta
gttgctcgtaacaactcagtcaaggagctcagcaaaggagttcagcgtgagatgagtgca
ggaattgctggtgttgcacgaatgtttgagcgcctagaccttaccccaaagaaacctgga
gcccccactccagtttctggttgtaatggaggcacttcaaatttcaagggaaaaggtgtg
ctagagaatgttattgttcagtcttgtaacaaaagtagcgggagaatcgctgatgagagt
tcagatggaccctctcacatcacagttgctgcaccaggccgtgttggtgttgaagtttct
tctgcgcagagcgaacactga
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