Prunus mume (Japanese apricot): 103322879
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Entry
103322879 CDS
T03196
Name
(RefSeq) SAC3 family protein B
KO
K23719
nuclear mRNA export protein SAC3
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103322879
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
103322879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
Motif
Other DBs
NCBI-GeneID:
103322879
NCBI-ProteinID:
XP_008223052
UniProt:
A0ABM0ND60
LinkDB
All DBs
Position
LG2:complement(30565757..30577371)
Genome browser
AA seq
1602 aa
AA seq
DB search
MYSGFGKASGPTEPPKAQPSFGNFSGRPPSPSPPTTPLFSASAPLRSPPRGPEALGKLHS
PFLAFEGARPAPSHPYPSAGVHRSTESLPSWDDGQRSFFKNYDTQAQERPSAVTSFIVSR
NSGTSVTAKIARFQDTKGARSPPFMSKDENIRNSTQGVPRSHLVTPRIRSPSLVSYEDLH
PFVGVEGRAFSSSGMENQPKLLEDHAELQAHQGPSLVSHFEGSFASGRNFPVKHDDVQVP
KRTRPSISPVMLNNGSNASFSTHDSRVHQRSLEFPSNTISEAAPSNLTSIPVAKRTRSPP
LLPEDQVFNGNSYATEDGTEREMQAKAKRLARFRVELTKTLPNNPDIVEQGVSANRHEQS
NVDKNKLVAYNSTEMAMDGTDGNALSENEGVELSGVIIGLCPDMCPESERAERERKGDLD
QYERLDGDRNQTSMSLAVKKYNRTAERDANLIRPMPILQKTIDYLLNLLDQPYNNRFLSI
YNFLWDRMRAIRMDLRMQHIFNQEAITMLEQMIRLHIIAMHELCEYSRGEGFAEGFDAHL
NIEQMNKTSVELFQLYDDHRKKGINIPTEKEFRGYYALLKLDKHPGYMVEPAELSLDLAK
MTPEIRQTSEVLFARDVARACRTGNFIAFFRLARKASYLQACLMHAHFSKLRSQALASVH
AGLQNNKGIPISDIAKWLALEEEEIESLSEYHGFVIKSFREPYMVKEGPFLNSDEDYPTK
CSKLVDMKKSRSIIKDLLTSTQLISLSTEATNEIQLIKKNKPEPKTVSYAERKSPVHDVP
AVGVIKSFHEVDEEMPNFEAVSSPKDVRQKQQMIQTPIFSSPEVYRQKQQTIQTPILCQY
TEHPQQMAAVPPSPWAFSSFKPQPDKVGTMEKPNYDSLFSNSPEKSMHSGMEGMPLHIES
KTALQDRSPVDTYSYGVEHPIRKIPVINKVEDEEPPDLDQEDENIDDMATDQHEEIAEAK
LKLILRLWKRRSLKLRELREQKQLAANAALNSLSLGPPVQLKTDQLSTSGEFDIDLILRE
RYKKQGKSWSRLNVSDVIADILGRRNPDARCLCWKTVVCSQMNNLEGELGQRSHVLGAAP
WLLSKLMPLENDVDDDDDDLIISSPGVSIWKKWIPGQSGSDMTCYLSVVKDANFDNLIET
VSGASAILFLTSESLPWKLQKIQLHNLLTSIPYGSCLPLLILSGSYNDIADPSSSVVDNL
GLHDLDKSRISSFLVVPLVENQQTEQVDGFFSDRRLREGLRWLASESPLQPILHHVKTRE
LILSHLNSSLDSLDKMKDYEVGPDNCILAFNEALGRSQKEISAAVQENPCSWPSPEIALL
EEFSDEYRVVKWYLPSIGWSAVQKVEPLISALGDSRLPDFPDNISWLPRCCNAGEEIENL
RIELENGLIEYLTHSSKLMGLALAMKEAHVMLQRSCRLERDDSCCYIVPNWVMIFRRIFN
WRLMGLASGTFSSAYILDCPHLNTAFGNLGKMGLEDSGPSPYYLDQPSLDEVIAVSYSPL
LSHRDQALLEADRTLPETSSNGEIHETPNTNDLMEMEDERRLMHDDQARVDDASRVNGTL
ENAGREIMMAGEVTKGAEKLSMLLEQCNILQNVIHEKLSIYF
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgtactcggggtttgggaaggcgtcagggccaactgaaccgccgaaagcacaaccatct
ttcggaaattttagtggtcgacctccttcaccttctccaccgaccacccctcttttttcc
gcgtctgcaccacttcgatcacctcccaggggacccgaagctctaggaaagctgcattca
ccgtttttggcctttgaaggtgctcgtcctgctccaagtcatccttacccatctgcggga
gtccataggtccacggaatctcttccgagttgggatgatgggcagagatcctttttcaaa
aattatgatacacaggctcaagaaaggccatctgcagtcacatcatttattgtttctcgt
aattctggaactagtgttacggccaagattgctaggttccaagacacaaaaggggccaga
tctcctccctttatgtctaaagatgaaaatataagaaattccactcaaggtgtccctagg
agtcacttagttactccaagaatacgatcgccttccttggtctcttatgaggatttgcat
ccttttgttggagtagaagggcgtgcattttcctcctctggaatggaaaatcagccaaag
ttgctagaagatcatgctgagttgcaggctcatcaaggaccttctctagtatcacatttt
gagggctcttttgcgtctggtagaaattttcctgtcaaacatgacgatgttcaagtccca
aaacgaacaaggccttctatatcacctgttatgttgaataatggatcaaatgccagtttt
agtactcatgattctcgggtacatcaaagatctttggaatttccaagcaatactatttca
gaagctgctccaagcaatttgacgagcatcccagttgccaaaagaacgaggtcacctcct
ttacttcctgaggatcaagtctttaacgggaactcttatgccactgaagatggtactgaa
cgagaaatgcaggccaaggcaaagcggttagcccggttcagggttgaattaacaaaaact
cttccaaacaatcctgacattgtagagcagggggtttctgcgaatagacatgagcaatct
aatgttgataagaacaaattggttgcatataattctactgaaatggctatggatggtact
gatggcaatgctttatcagagaatgaaggtgtggaattgtctggtgtcatcattgggcta
tgcccagatatgtgtccagagtcagaaagggcagaacgagaaaggaaaggggaccttgat
cagtatgagcgcttggacggggatagaaatcaaacgagcatgtcccttgctgttaaaaag
tataacagaacagctgagcgagatgcaaacttgataagaccgatgccgatcctgcagaag
acaattgattatttgctcaatttgctcgatcagccttacaataataggtttcttagcata
tataacttcttatgggataggatgcgagcaatccgaatggatttgagaatgcaacacatt
tttaaccaagaggctattactatgctggagcaaatgataagacttcatataattgccatg
catgaattatgtgaatactcaagaggagagggctttgcggaggggtttgacgcacacctc
aatattgaacagatgaataaaacatctgttgaattgttccaattgtatgatgatcacaga
aagaaaggaataaacattcctacggaaaaagagtttcgaggttactatgcccttctcaag
ctggacaaacatcctgggtatatggttgaacctgcagagctctccctcgatcttgcaaag
atgaccccagaaataagacaaacttcagaggttctatttgcacgtgatgtagcaagagct
tgcagaactggtaattttattgccttctttcgacttgcgaggaaagcaagttacctccaa
gcatgcctaatgcatgctcacttctcaaagttacgaagccaggcacttgcttctgtgcat
gcaggtcttcaaaataataaagggatccctatttccgatattgccaagtggctagcattg
gaggaagaggaaattgaaagcctttcagagtatcatgggtttgtaataaagtcctttcga
gagccatatatggtgaaggagggcccatttctcaatagtgatgaggactatcctaccaag
tgttctaagcttgttgatatgaaaaagtcaagaagcataatcaaggatcttttgacttct
actcaactcatatccttgtcgactgaagcaacaaatgagattcagcttattaagaaaaat
aagcctgaaccaaaaactgtttcatatgctgaaaggaaaagtcctgtccatgatgtccca
gcggttggagtaataaaatccttccatgaagttgatgaagaaatgcctaattttgaagct
gtttcatccccaaaagatgtcagacaaaagcagcaaatgattcaaacacctattttttca
tctccagaagtttacagacaaaagcagcaaacaattcaaacaccaattctttgtcaatac
actgaacatccccaacagatggctgctgtccctccttccccatgggctttctcatcattt
aaaccccagcctgataaagttggtacaatggagaagccgaactatgattctcttttcagt
aactctccagagaaaagcatgcattctggcatggaaggaatgccattgcatattgagtca
aaaacagctctgcaagacagatctccagttgatacatatagttacggtgtggaacatcca
atcagaaaaattccggtcattaataaggtggaagatgaggaacctccagatcttgatcag
gaagatgaaaatattgatgatatggcaactgatcaacatgaagaaattgctgaggcaaaa
ctcaagttgatactaaggttatggaagcggcgttctctgaagctaagggaactgcgagag
caaaagcagttagcagcaaatgctgcattgaattctttatcattggggccaccagttcaa
ctcaagacagatcaactgagcacatctggtgagtttgacattgatctcattttgagggag
agatataaaaagcaaggaaaatcatggtcaagacttaatgtttcagatgtaatagcggat
atactagggagaagaaacccagacgctagatgcctctgttggaaaactgttgtatgttcc
cagatgaacaatctggaaggtgaactgggacagaggagccatgtcttgggagcagcccca
tggttgctttcaaagctcatgcctttggaaaatgatgtggacgacgatgatgatgatctc
ataatttcatctcctggtgtgtcaatatggaagaaatggattcctggccaatctggttca
gatatgacctgctatttgtctgtggttaaggatgcaaattttgataatctaattgaaact
gtatctggtgcaagtgctattttgttccttacatctgaaagcctcccttggaaattgcaa
aaaatccagctccataaccttctgacgtcaataccttatggttcctgcttgccccttctg
atcttaagcggctcatacaacgacattgcagatccttcttccagtgttgttgataatttg
ggtctccatgacttggataagtcacgaataagcagctttctagttgttccccttgttgaa
aaccagcaaacagaacaagtggatgggtttttcagcgacaggcgacttagggaggggctc
agatggcttgcaagtgaatcacctcttcaacccattcttcatcatgtaaaaacacgtgaa
ctcattcttagccacttgaattcttcgttggattcactagacaaaatgaaagattatgaa
gtaggtccagacaactgtatccttgccttcaatgaagccttgggtcggtcacagaaggaa
atttctgctgctgtccaggaaaatccttgcagttggccttcccctgagattgctttactc
gaggagtttagtgatgagtacagggttgtgaagtggtacttgccaagcataggatggagc
gcagtgcaaaaagttgaaccattaatttcagctctaggtgattctaggcttccagatttt
cctgacaatatttcgtggttgcccagatgttgtaatgctggagaggagattgaaaacctg
agaattgaacttgaaaatggcttaatcgaatacctgacacattcaagtaagttgatgggg
cttgcacttgctatgaaagaggcacatgtaatgttgcaaagaagttgtcgacttgagcgc
gatgactcgtgctgctacattgttccgaattgggttatgattttcagacgaatcttcaac
tggcggttaatgggtttagccagtggtaccttttcatcagcttatatcttggactgtcct
catcttaacacagcttttggaaaccttggtaagatggggcttgaagatagcggaccttca
ccttattatcttgatcagccatctctggatgaagtcattgcagttagctatagccctctt
ttgtcccatagagatcaggctttgctagaagctgatcgaactcttcctgaaacatcttcc
aatggtgaaattcatgagacccctaacacaaatgacttgatggagatggaggatgaaaga
cgtttaatgcatgatgatcaagcaagggtagatgatgcatctcgcgtaaatgggacacta
gagaatgctggcagagaaataatgatggctggagaagtaacaaagggagctgaaaaatta
agcatgttgttagaacagtgtaacatattacagaatgtgatacacgagaagctgtccatt
tatttctga
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integrated database retrieval system
