Prunus mume (Japanese apricot): 103322934
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Entry
103322934 CDS
T03196
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103322934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103322934
03036 Chromosome and associated proteins [BR:
pmum03036
]
103322934
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
103322934
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
103322934
RSF complex
103322934
WICH complex
103322934
B-WICH complex
103322934
NORC complex
103322934
BRF complex
103322934
NuRF complex (fruit fly)
103322934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
DEAD
HDA2-3
DBINO
CHDII_SANT-like
AAA_14
AAA_22
Motif
Other DBs
NCBI-GeneID:
103322934
NCBI-ProteinID:
XP_008223115
LinkDB
All DBs
Position
LG2:31106981..31113838
Genome browser
AA seq
1075 aa
AA seq
DB search
MARASKPQVSSDEALSNGSNSSEEDPINDQEEEVDEEELEAVARSADSDDDEAAAFPGSD
DDVAADENGDDGFEEDEDDDTNLSNAEIGKREKARLRDMQQMKKQKVQEILDTQNAAIDA
DMNNKGKGRLKYLLQQTELFAHFAKSDQSASQKKVKGKGRHASKITEEEEDEECLKEEED
GLSGTGTTRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL
GYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPTLRAVKFLGNPDERKHIREDLLVAGN
FDVCVTSFEMAIKEKTCLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNFRLLITGTP
LQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSD
VEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPY
LFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMF
RGYLYCRIDGNTGGEDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADIVILYDSDW
NPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQK
TVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFK
MDDTAELYDFDDEKDEKLDFKKIVSDNWIEPPKRERKRNYSESEYFKQTMRQGGPAKPKE
PRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQVKDTIEVDEPEEVGDPLTAEE
VEEKERLLEEGFSSWSRRDFNTFIRACEKYGRNDIKSIAAEMEGKTEEEVERYAKAFKER
YKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEE
CDRFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQ
EYDERERQARKEKKLAKSMTPSKRAMGRQPTESPTSGKKRKQLTMDDYVSGKRRK
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagcctcgaagccgcaggtatcgtccgatgaagccctatccaacggctccaat
tcgtccgaggaggacccgatcaatgaccaggaggaggaggtggacgaggaggagctcgag
gccgtggctcgctccgctgattcagacgacgacgaggccgccgccttccctggctcagac
gatgacgtggctgccgatgagaacggcgatgacggctttgaggaggatgaggatgacgac
actaatttgagtaatgctgaaattggaaaacgggaaaaggccaggcttagagacatgcaa
caaatgaagaagcaaaaggttcaggaaattttggatacgcaaaatgcagccattgatgct
gacatgaacaataagggaaaggggcggttgaagtatcttctgcagcaaacagagttattt
gcccattttgccaaaagtgatcaatctgcatcccagaagaaagtgaagggaaaaggtcgc
catgcttcaaaaataactgaagaggaagaagatgaagaatgccttaaggaggaagaagat
ggtttgtctgggactggaaccacacggctgttgacgcaaccttcttgtattcaggggaag
atgagggattaccaacttgctgggttgaattggctcatacgactctacgaaaatggtata
aatggaatcctcgcagatgaaatggggcttggtaaaacattgcaaaccatctccttgttg
ggatacctgcatgagtttagagggataactggccctcatatggtagttgctccaaagtca
acacttggaaactggatgaatgagattcggcgtttctgccccaccttgcgtgctgtaaag
tttcttggtaatcctgatgaaagaaagcatatacgtgaggacctgctggttgcgggaaat
tttgatgtctgtgttacaagtttcgaaatggccatcaaagagaagacttgcctacgccgt
tttagctggcgctatataatcattgacgaagcccatcgaatcaagaacgagaattcactg
ctttcaaaaactatgaggctttataataccaatttccgccttctaattacgggcacacca
cttcagaacaatctccatgaactatggtctctgcttaactttcttctgcccgagatattt
agttctgcagaaacttttgatgaatggtttcaaatttctggtgaaaatgaccagcaggag
gttgttcaacagcttcataaggtcctccggccatttcttctccgaaggttgaagtcagat
gttgagaaaggtttgcctccgaaaaaggaaacaatactcaaagtgggcatgtcacaaatg
caaaaacaatactacagggctttactgcaaaaagatcttgaagttgttaatgctggcgga
gaacgtaagcgccttctgaacatagcaatgcagcttcgtaaatgctgcaatcatccatat
ctttttcaaggtgctgagcctgggcctccttatacaactggagaccatcttatcacgaat
gctggcaaaatggttcttttggataagttgcttccaaagttaaaagaacgtgattctagg
gtcttaatattttcacagatgacaaggctgctagatattcttgaagattatttaatgttt
cggggctacctgtattgtcggattgatggaaatactggtggagaagatcgtgatgcttcc
attgatgcctttaataagcctggaagtgagaaatttgtttttttgctatcaaccagagct
ggaggacttggtattaatcttgctactgcagatattgtcattctttacgatagtgattgg
aaccctcaagttgatttgcaagcacaagaccgtgctcacaggattggtcaaaagaaagaa
gttcaagtgttccggttctgcactgagtatactattgaggagaaagtgattgagagggct
tataaaaagcttgcgcttgatgctttggtgattcaacaagggcgattagcagagcaaaaa
actgttaataaagacgagttacttcaaatggtgaggtttggtgctgaaatggttttcagc
tccaaggacagtacaattactgatgaggacatcgatagaatcattgctaaaggagaagag
gcaactgctgagcttgatgcaaagatgaagaaatttactgaagatgctataaaatttaag
atggatgatactgctgaattgtatgactttgatgatgagaaggatgagaagctcgacttc
aagaaaattgttagcgacaactggattgagccaccaaaaagagagcggaagcgcaattac
tcggagtcggaatattttaagcaaacaatgcgccaaggtggtccagcaaaaccaaaagag
cctcgaattccacgcatgcctcaattacatgatttccaattttttaacacacagaggctc
agtgagctgtatgaaaaggaagtacggtacctcatgcaaacacatcaaaagaatcaggtg
aaagacacaatagaggtggatgaaccggaagaagttggggatccattgactgctgaagag
gtggaagaaaaggaacgtctgttggaagagggtttctcttcttggagtagaagagatttc
aataccttcattagggcctgtgagaagtatggccgaaatgacataaaaagcattgcggcc
gagatggaggggaaaacagaggaggaagttgaaagatatgcaaaggcttttaaagaaaga
tacaaggaattaaatgattatgatagaatcatcaagaacattgaaagaggagaggctagg
atttcccggaaagatgagatcatgaaagctattgggaagaagttggatcgttacaagaat
ccatggctggaactgaagatccagtatggtcagaacaaggggaagttgtacaatgaagaa
tgtgatcgtttcatgatatgcatggttcacaagcttggatatgggaactgggatgagttg
aaggcagcatttcgcacgtcacccttgtttcgttttgattggtttgtgaagtctcgcaca
acacaggaacttgctaggaggtgtgatacattaataagattggtggagaaagagaaccaa
gaatatgacgagagggagagacaagcacgcaaagagaagaagcttgctaagagcatgaca
ccgtcaaagcgtgccatgggtaggcagccgactgagagcccgacttccggaaagaagaga
aagcagttaactatggatgattatgtctcgggaaagaggagaaaatga
DBGET
integrated database retrieval system
