Prunus mume (Japanese apricot): 103322941
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Entry
103322941 CDS
T03196
Name
(RefSeq) probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103322941
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmum01009
]
103322941
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103322941
03036 Chromosome and associated proteins [BR:
pmum03036
]
103322941
Protein phosphatases and associated proteins [BR:
pmum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103322941
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103322941
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103322941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_7
EF-hand_1
EF-hand_8
EF-hand_5
EF-hand_13
Motif
Other DBs
NCBI-GeneID:
103322941
NCBI-ProteinID:
XP_008223122
LinkDB
All DBs
Position
LG2:complement(31159479..31164246)
Genome browser
AA seq
477 aa
AA seq
DB search
MYSGSSDGEGHEAAQRKIPPASSMLWVRNLRRFIGSGTGLGSEALMELETKRILLDIFKE
KQQKSAEAGTIPSFYKKKPEDGSISHRVQRLAKYRFLKKQSDLLLNADDLDAMWVCLREN
CVIDDATGAEKMNYEDFCHIASVCTEQIGPKCRRFFSPSNFMKFEKDEQGRIAILPFYLY
VMRTVSLTQARIDMSELDEDSDGFLQPQEMEAYIRGLIPNLAQLRDMPASFVQMYCRIAA
QKFFFFCDPHRRGKACIKKVLLSNCLQELMELHQESEEEVTDTEQAENWFSMASAKRVCD
IFILLDKDNNGTLSKQELREYADGALTEIIIERVFDEHVRRGKVGGASSREMDFDSYLDF
VLALENKDTPEGLTYLFRCLDLNGRGYLTTADIHSLFRDVHQKWIEGGNYELCIEDVRDE
IWDMVKPADPLRITLADLLACKQGGTVASMLIDVRGFWAHDNRENLLQEEEEPEEES
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtgggtccagtgatggcgaaggccatgaggccgcgcaaaggaagatcccgcct
gcttcgtccatgttgtgggtccggaacctccgccgcttcatcggatccggtaccggactc
ggatccgaagccctcatggagcttgaaacaaagagaatcttgcttgatattttcaaagag
aagcaacaaaaaagtgctgaagctggcacaataccaagtttctataagaagaaacctgaa
gatggatctattagtcacagggtccagaggctggcaaaatatcggtttttaaagaagcaa
tcagatcttttgctaaatgctgatgatttagatgctatgtgggtttgcttaagggaaaat
tgtgtgattgatgatgcaactggtgcagaaaagatgaattatgaagacttttgccacatt
gcctctgtatgtacagagcagatagggcccaaatgccgtcgctttttcagcccttccaat
ttcatgaagtttgagaaagacgaacaaggaagaattgccattctgcccttttacctttat
gtgatgagaacggtttcacttacccaagctagaattgacatgagcgagcttgatgaggat
tctgatggtttccttcaacctcaagaaatggaggcctatatacgaggtcttatacctaat
ctggctcaattacgggacatgcctgcaagctttgttcaaatgtattgccgcatagctgcg
cagaagttcttcttcttctgcgaccctcatagacgaggaaaagcatgcataaaaaaggtg
ttattaagtaattgtctccaggaactaatggaactgcaccaggaaagtgaggaagaagtc
actgacactgagcaagctgaaaactggttctctatggcatctgccaagcgcgtatgtgac
atcttcattttgcttgataaagataacaatggaacattgagcaagcaggagcttcgagaa
tatgcggatggggcattgactgaaattatcattgaaagagtgtttgatgagcatgttcga
cgaggaaaagttgggggagcaagttcaagggagatggactttgatagttatctggacttt
gttctggccttagaaaacaaagacactccagaagggttaacatatttgtttcgatgtctt
gatcttaacggaaggggttaccttacaacagctgatatacactctcttttcagggatgta
catcagaaatggatcgagggtggaaactatgaattgtgtattgaggacgtaagggacgaa
atctgggacatggttaagccagctgatccactacggataacgttggctgatttactagct
tgcaaacaaggtggcactgtagccagtatgctcatagatgtgcgtggtttctgggcgcat
gacaatagagaaaatcttcttcaagaagaggaggaacccgaagaagaatcgtaa
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