Prunus mume (Japanese apricot): 103323170
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Entry
103323170 CDS
T03196
Name
(RefSeq) phytochrome B
KO
K12121
phytochrome B
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103323170
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Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
HATPase_c
PAS_4
PAS_9
PAS_8
Motif
Other DBs
NCBI-GeneID:
103323170
NCBI-ProteinID:
XP_008223364
UniProt:
A0ABM0NDY4
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All DBs
Position
LG2:32670815..32676611
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AA seq
1119 aa
AA seq
DB search
MASGAQSSGTGHAKAHNNTESVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSMRTTKD
SVPEQQITAYLSKIQRGGHIQPFGCMMAVDEATFGVIAYSENARDLLDLTPQSVPNLEKP
EILTIGTDVRTLFTPSSAVLLEKAFGAREITLLNPIWIHSKISGKPFYAILHRIDVGVVI
DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKILCDTAVESVRELTGYDRVM
VYKFHEDEHGEVVAESKRPDLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVHV
IQDEGLMQPLCLVGSTLRAPHGCHSQYMANMGSIASLALAVIINGNDEEAIGGRNSMRLW
GLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR
DTPAGIVTQSPSIMDLVKCDGAALYYQGKYYPIGVTPTEAQIKDIVEWLLAFHGSSTGLS
TDSLGDAGYPGAASLGDAVCGMAAAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ
RMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQIILRDSFKDAETNNSKAVTQAQLGDL
EFQGINELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEEATGKSLVH
DLVYKESEEIVDRLLFRALRGEEDKNVEIKMRTFGPEHDNKPVFVVVNACCSKDYASNIV
GVCFVGQDVTGQKVVMDKFIKIQGDYKAIVHSPNPLIPPIFASDDNTCCSEWNTAMAKLT
GWSHGEILGKMLVGEVFGSCCRLKGPDAMTKFMIVLHNAIGGLDTDKFPFSFFDRNGKYV
QALLTANKRVNAEGQVIGAFCFLQIASSELQQALKVQRQQENECFSRMKELAYICQEIKN
PLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQILKIIKDVDLDSIEDGSLELEKSEFF
LGSVINAVVSQVMLLLRERDLQLIRDIPEEIKTLAVCGDQVRIQQVLADFLLNMVRYAPS
PEGWVEIHVLPSLKKVPDGVTLLHTEFRLVCPGDGLPPQLVQDMFHSSQWMTQEGLGLSM
CRKILKLMNGEVQYIRESERCYFLIILEFPMPRSTKSID
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggtgctcagtcgtcgggcacaggccatgccaaagctcacaacaatacagag
tctgtaagcaaagccattgctcagtacaccgtcgatgctcggctgcacgcggtgtttgag
cagtcaggcgagtctggtaagtccttcgactactcacagagcatgaggaccaccaaagac
tcagtcccggagcagcagattacagcttacctgtccaaaattcaaaggggtggccatatt
caaccctttgggtgcatgatggctgtggacgaagccacctttggggtcattgcgtacagc
gaaaacgcccgagacctgctcgacctaacgccgcagtcagttccgaacctcgaaaaacct
gagatcctcactattgggactgatgtccgtacactcttcacgccctccagcgcagttttg
ctcgagaaagcatttggagctcgggagattacacttttgaacccaatttggatccactcc
aagatttctggaaagcccttttacgcaattctgcatcggattgatgttggggttgtgatt
gatttggagcctgctagaacagaggaccctgcgctgtctatagccggcgcggttcagtct
cagaaattggcagtgagggcaatttcacagctgcagtcactgcctggtggggacattaag
attttgtgtgatactgcggttgagagtgtaagggagcttactggttatgatagagttatg
gtgtataagtttcacgaggatgagcatggtgaggttgtggctgagagcaagaggcctgac
ttagagccatatcttgggctgcactatcctgccacggatatacctcaggcgtcgaggttt
ttgttcaagcagaaccgggtcagaatgatagtagactgtcatgccacgccggtccatgta
attcaggatgaagggctgatgcagcctctgtgcttggttggatccacacttcgtgcccct
catggttgtcactcccagtatatggctaatatgggctccattgcttcgctagctttggca
gtcatcatcaatggaaatgatgaggaagctataggcgggaggaactcaatgagactatgg
ggcctggttgtttgccaccatacctctgctcggtgcattccgtttccccttcggtatgct
tgtgagttcctaatgcaggcctttgggcttcagttgaatatggaattgcaattggcttca
caattgtctgagaaacatgttttgaggacccagactctcttgtgtgatatgcttcttcgt
gacaccccagctggcattgttactcaaagtcctagtattatggaccttgtgaagtgtgac
ggggctgcactatactaccaagggaagtactacccaataggtgtgaccccgactgaagcg
cagataaaggacattgtggagtggctgttggctttccatggaagttcaacaggtttaagc
acagatagtttgggtgatgctgggtaccctggagctgcctctctgggcgatgctgtttgt
gggatggctgctgcttatatcactaagagggattttctgttctggttccgatcccacact
gcaaaagagatcaaatggggtggagcaaagcatcatccagaggacaaggatgatggacag
aggatgcatccacgctcttcattcaaggcatttttggaagtggttaaaagccgtagtttg
ccgtgggagaacgcagaaatggatgcaatacactctttgcagattattttgagagactca
tttaaggatgcagagacaaacaattcaaaagctgttacgcaggcccagcttggtgatctg
gagtttcaagggatcaatgagctcagctcggtagcaagagaaatggttagattgatagag
acagcaactgctcccatatttgctgtagacgttgatggatgtataaatgggtggaatgca
aaggttgcagagttgacaggtctctcagtcgaggaagcaaccgggaagtccttggttcat
gatcttgtttacaaagaatctgaagaaattgttgacagacttcttttccgcgctttaaga
ggagaagaagataagaatgtagaaataaaaatgaggacatttggcccagagcacgacaac
aagcctgtttttgtggtggttaatgcttgctgtagcaaggattacgccagtaatatagtt
ggagtttgcttcgttggtcaggacgtaactggtcaaaaagtagtaatggacaagttcata
aaaatacaaggtgattacaaggccatcgttcatagtccaaaccctttgatccctcctata
tttgcttcagatgataacacatgttgctcggaatggaacactgccatggcaaagctcact
gggtggagccatggagaaatccttggaaaaatgttagttggagaggtcttcggcagttgc
tgtcgactcaagggtccggatgctatgacaaaattcatgattgtcctacacaatgccatt
ggagggctagacacagacaaatttcccttttcattctttgaccgaaatgggaaatatgta
caagctctcttgacagccaataagagggtgaacgcagaaggtcaggttattggagctttc
tgctttttgcagattgcaagttcagaactgcagcaagctcttaaagttcagaggcaacag
gaaaatgaatgtttttctaggatgaaagaattggcttacatttgccaggaaataaaaaat
cctttaagtggtatacgctttaccaactcacttttggaggctacagacttaactgaggat
caaaagcagtttttggagactagtgctgcttgtgagaagcaaattttgaagattataaaa
gatgttgatctggatagcattgaagatggatcactggagcttgagaagtcagagttcttt
cttgggagtgtcataaacgctgttgttagccaagtaatgttattgctgagggaaagggat
ctacaattgattcgggatattcctgaagaaatcaaaacattggctgtttgtggtgatcaa
gtgagaattcagcaggtcttagctgatttcttattgaatatggtacgttatgcaccatct
ccagaaggttgggtggagattcatgttcttccaagcttgaagaaagtacctgatggagtc
actctgcttcatactgaattcaggttggtatgtcctggtgacggtcttcctcctcaatta
gttcaagatatgttccatagcagtcaatggatgactcaggagggcctaggactgagcatg
tgcaggaagattttaaagctcatgaatggagaagtccaatatatcagagagtcagaaaga
tgttatttcttaattattcttgagtttcctatgcctcggagtacaaagagtattgactag
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