Prunus mume (Japanese apricot): 103323201
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Entry
103323201 CDS
T03196
Name
(RefSeq) U-box domain-containing protein 13 isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103323201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103323201
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103323201
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
U-box type E3
103323201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
MLKL_N
zf-RING_UBOX
Neurochondrin
HEAT_EZ
zf-C3HC4_4
zf-Nse
Arm_2
zf-C3HC4_2
MCAfunc
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
103323201
NCBI-ProteinID:
XP_008223401
LinkDB
All DBs
Position
LG1:complement(5237571..5243446)
Genome browser
AA seq
666 aa
AA seq
DB search
MEKDKVALVQSLIDLVNEIASISDYRCTVKKQYCNLARRLKLLTPMFEEIRDSKEAVPGE
TVKALLSFMEALESAKDLLRIGSESSKIYLVLEREQIMKKFHEVTSQLEQALSGIAYENL
DISDEVKEQVELVLAQFRRANGRFDSPDVELYEDLLSLYSRNDATTDPAVLKRLVEKLEL
TGIAELTQESLALHEMVTSSGGDPGESIEKMSMLLKKIKDFVQTENPNLEAPPATEKNIL
ASCSGQASTDKNHKVPPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHGTC
PKTQQNLSNTTLTPNYALRSLIAQWCEANGIEPPKRPNARLNKTASACSPAERTKIEILL
RKLMSANPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAVTAL
LNLSICEDNKGSIISCGAVPGIVHVLKNGGMEARENAAATLFSLSVVDENKVRIGASGAI
PPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVSTLMQLLTEPGGGMVDEAL
AILAILASHPEGKSAIGAAEAVPVLVEVIGTGSPRNRENAAAVLVHLCSGDQQHIVEAQE
LGVMGSLMELAQNGTDRGKRKAAQLLERINRFVEQQTQQAQAQAEAQSETETQQSQPPST
TNAVDS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagacaaagtcgctctggtgcagagcctgatcgacctagtcaacgaaatagct
tcgatctccgactacaggtgcacggtcaagaagcagtactgtaatttggcgaggaggttg
aagctgctgacgccaatgttcgaggagattagggatagcaaggaggcggttcctggggag
actgtgaaggccttgctttccttcatggaggctctggaatcggctaaggacttgctcaga
atcggaagcgaaagcagcaagatttacctggtcctggaaagggagcaaattatgaagaag
ttccatgaggtgacatctcagttggaacaagctttaagtggaattgcctatgaaaatctt
gacatatcagatgaagttaaggaacaggttgaactagttcttgctcagttcagaagagca
aatggaaggtttgattcaccagatgttgagctctatgaggatctcttatccctttacagt
agaaatgatgcaacaacagatccagctgtcctaaaaagattggttgaaaagttagaattg
acagggatagctgaacttacacaagagtcactagccttgcatgagatggttacttccagt
ggtggggatcctggagagagcatcgagaagatgtcaatgctactgaaaaaaattaaggat
tttgtacaaacagaaaaccccaacttggaagctcctcctgcaacagaaaagaatatatta
gcaagttgcagtggacaagcatctactgacaaaaatcacaaggttcccccagttattcca
gatgattttcgctgtccaatatcattggagttaatgaaggaccccgtcattgtttcaacc
gggcagacctatgaacgttcctgtattgaaaagtggcttgaagcagggcatgggacatgt
ccgaaaacgcaacagaacctctctaataccaccctcacaccgaactatgctttacgtagc
ctcatagcccagtggtgtgaggcaaatggcattgaaccaccaaaaagacccaatgctcga
cttaataaaactgcatctgcctgctcgcctgcagaacgtacgaagatcgaaattctcctc
cgcaagctgatgtcagcaaaccccgaagaccaaaggtctgctgcgggtgaaatccggctt
cttgccaagcgtaatgctgataatcgtgtggctattgcggaagctggtgcaatccccctg
cttgttggccttctttcaacccccgactcccgcacccaggagcatgctgtgacagcactt
ctcaacctttccatatgcgaggataacaaaggaagcatcatatcctgtggagcagttcct
ggtattgttcatgttctcaagaatggaggcatggaagctcgggaaaatgcggctgctaca
cttttcagcctttctgttgttgatgaaaataaagttagaattggtgcttcgggagccatt
ccaccacttgtaacattgctaagtgaaggtactcaaagagggaagaaagatgccgctaca
gcactttttaacttgtgcatttatcaagggaacaaggggaaggcggtaagggctggtgtt
gtttcgacactaatgcagctactgacagagcctggaggtggaatggtggatgaggcacta
gccattctagcaatactggccagtcatcctgaagggaaatcagccattggagctgccgag
gcagtgccagttttggttgaagttattggtactggatctccccgaaacagagaaaatgca
gctgcagttttggtgcatctttgttccggagaccaacaacatatagtagaggctcaggaa
cttggggtgatgggttcattaatggagttggcacaaaatggcacagatagaggcaagaga
aaggctgcccagttgcttgagcgaataaatcggtttgttgagcagcagacacagcaggct
caggcacaagccgaggctcaatctgagaccgagacccagcagtcacagccaccctccaca
acaaatgctgttgacagctga
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