Prunus mume (Japanese apricot): 103323328
Help
Entry
103323328 CDS
T03196
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03060
Protein export
pmum04141
Protein processing in endoplasmic reticulum
pmum04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
103323328
04141 Protein processing in endoplasmic reticulum
103323328
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103323328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103323328
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmum02044
]
103323328
Membrane trafficking [BR:
pmum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
103323328
Secretion system [BR:
pmum02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
103323328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TssN
Motif
Other DBs
NCBI-GeneID:
103323328
NCBI-ProteinID:
XP_008223538
LinkDB
All DBs
Position
LG2:complement(33946984..33958237)
Genome browser
AA seq
550 aa
AA seq
DB search
MLITVRGAFSSSPLCFSNPHSHSFSYLTSKASPRLKRSVCKASFSVQRKPNTNSTTSWKL
GVLSNRTEAPVFDPLGINSDCNSGLNATWESFLGLLSQKLESASSSKKDKPTSARGLAAA
IEDSSIDFGDFFRGPLPGKFLMLLAYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLD
SFSGGGIGRLGICSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKILRYTQYAS
VGFAIVQAIGQVFYLRPYVNDFSTEWVLSSVTLLTLGSVLTTYIGERISDLKLGNGTSLL
IFTSIISYFPASVGRTVAQAFQDGNYVGLAAITVSFFLLVLGIVYVQEAERKIPLNYASR
YNSSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLAALKNTAVALNPGG
SLYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRIS
VLGSAFLAILAAGPSVIEQVTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNI
EFYNIDKFGP
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgttgataacggtcagaggagccttttcttcttctccgctttgcttcagcaacccccat
agccatagcttctcttatcttacttccaaagcctctccaagactgaaaagatcagtgtgc
aaagccagcttctctgttcagagaaaacccaacacgaacagcactacatcttggaagctt
ggcgttctctccaaccgcactgaagccccagtttttgatcctttgggcatcaattcagat
tgcaattctggtctaaatgctacctgggaaagtttcctaggcctattatcacaaaagtta
gagagcgcctccagttcaaagaaggataaacctacttcagctagaggattggcagctgca
atagaggatagttccattgattttggagacttcttcagaggcccattaccaggaaagttt
ctcatgctgttggcatatctggccttatctcgacttggaatatatatacctcttggtggg
gtaaatcgtgaggcttttgttggaaatttggaccagaacagtttattgagcaccttggat
tcattttctggaggaggtattggcagactggggatatgttcactgggtattgttccattc
atcaatgctcagattgtcttccagcttcttgcacaaatttatcccaagttacaggatctt
cagaaaagagaaggtgaagcaggaagaaagaaaattctgcggtatactcaatatgcttca
gttggttttgccattgtccaggcaattggccaagtgttctaccttcgcccatatgtcaat
gacttcagtacagagtgggttctctcttctgttaccttattgacgcttggctcagtattg
acgacgtacattggagaacggatctcagacctaaaacttggaaatggcacatctcttttg
atattcacaagtattatatcatactttccagcatctgttggtagaactgtagcacaggca
tttcaggacggtaactatgttggacttgctgccataaccgtctccttctttctgttggtc
cttggaattgtatatgttcaggaagcagagaggaaaattccacttaactatgcctcaaga
tacaacagcagcagaagtggagggcttcaaagatctgcttacctaccctttaaggtgaat
agttctggagttatgccaataatattttctacgtcatcattagctcttcctggtactcta
gcacgcttcactggtttagctgcattgaagaatactgcagtggctttaaacccagggggt
tctctctatctccccaccaacatcctcttaatagccttcttcaactactactacactttc
ctacagttggatcctgatgatgtgagtgaacagttgaagcgccaaggtgcatcaattcca
ctcgtacgaccgggtaaaagtacagctgcatttctgaagacggttctaagtcgaatatca
gttcttggttcagcctttctggcaatcctagctgctggtccttctgtgattgaacaagtc
acacacctgactgcttttcggggattcgctggcacttctgttctcattctcgttggttgc
gcaactgacactgcgagaaaagttcaagcagaaataatatcccaaaagtacaagaacata
gagttctataacatcgataagtttggcccataa
DBGET
integrated database retrieval system
