Prunus mume (Japanese apricot): 103323361
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Entry
103323361 CDS
T03196
Name
(RefSeq) LOW QUALITY PROTEIN: cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103323361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103323361
03036 Chromosome and associated proteins [BR:
pmum03036
]
103323361
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
103323361
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
103323361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_RIG_1st
RMC1_N
Ge1_WD40
Pep3_Vps18
Beta-prop_VPS8
Beta-prop_SPT8
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
103323361
NCBI-ProteinID:
XP_016647996
LinkDB
All DBs
Position
LG2:34420831..34423854
Genome browser
AA seq
454 aa
AA seq
DB search
MDAGSMSSSSKLKSESRWPLRQQLLQERNSKENLDRFIPNRSAMDFDFAHFMLTEGRKVK
KNPAMVSSPSKEAYRKQLAESMNMNRTRILAFKNKPPGPVELFPREFSSLPQDKPAKPRW
HIPQTSERTLDAPDLVDDYYLNLLDWGSCNVIAIALANTVYLWDATNGSTSEVATFEDEV
GPVTSVSWAPDGRHIXIGLDNSEVQLWDSTDNKQLRTLRGCHRSRVGSIAWNNHILTTGG
MDGCIVNNDVRVRSHIVETYRGHKQEVCGLKWSASGQQLASGGNDNLLHIWDRSVASSNS
PTQWLHRLEDHTAAVKALAWCPFQGNLLASGGGGGDWCIKFWNTHTGACLNSVDTGSHVC
ALLWNKNERELLSSHGFTQNQLTLWKYPSMAKIAELTGHTSRVLYMAQSPDGCTVASAAG
DETLRFWNVFGVPEVAKPAPKSNPEPFAHFNRIR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggatcaatgagttcttcgtctaagttgaagtcagagtctaggtggcctctt
cgacaacaacttcttcaggaaaggaattctaaggaaaatctggacaggttcatccccaac
agatcagcgatggattttgatttcgcgcacttcatgctgactgaaggtaggaaagttaag
aaaaacccagctatggtatcttccccatccaaagaggcttatcggaagcagttggcagag
tccatgaacatgaaccggactcgaatcctagctttcaagaacaagcctccgggccctgta
gagctcttcccacgcgagttctcttctttaccacaggacaaaccggcaaagccccgatgg
cacattcctcaaacttcagagaggacattggatgctcccgatcttgtggatgattactac
ctgaatttgttggattggggaagctgcaatgttatcgcgatagctcttgcaaacacagtt
tatttgtgggatgctaccaatggttctacttcagaggtcgccacatttgaggatgaagtc
ggacctgttaccagtgtgagttgggcgcctgatggacgccacatttgaattggactggac
aattctgaagtacagttgtgggattcgactgataataagcagctgagaactttgagaggt
tgccacagatcacgagtaggctccattgcatggaacaatcacattcttacaactggagga
atggatggctgtatcgttaataatgatgtaagagttagatcacacattgttgagacatac
agaggacacaaacaagaggtttgtgggcttaaatggtcagcctcaggccagcaattagct
agtggaggaaatgataacctcctccatatatgggacagatcagtggcatcttcaaattca
ccgactcagtggcttcacaggcttgaagaccatactgctgctgtgaaagcccttgcttgg
tgtcctttccagggcaacttattagcttctggtggaggtgggggtgattggtgcataaag
ttttggaacacccacacaggtgcatgtctgaactcggttgacactggctctcatgtttgt
gctttgctgtggaacaagaatgaaagagagctgcttagttcacatggatttacccaaaat
cagcttactctttggaagtacccctcaatggctaaaattgcagaactcactggccatact
tctagagttctttatatggctcagagcccggatggttgcacagtggcatcagcagctggt
gatgaaacactcagattctggaatgtgtttggggttcctgaggtggctaaaccagctccc
aaatctaaccctgaaccttttgctcatttcaatcgtatccgctga
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