Prunus mume (Japanese apricot): 103323374
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Entry
103323374 CDS
T03196
Name
(RefSeq) autophagy-related protein 18b isoform X1
KO
K17908
autophagy-related protein 18
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103323374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103323374
03029 Mitochondrial biogenesis [BR:
pmum03029
]
103323374
Membrane trafficking [BR:
pmum04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
103323374
Mitochondrial biogenesis [BR:
pmum03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103323374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_Vps41
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
BCAS3_WD40
Beta-prop_IFT140_1st
Beta-prop_RSE1_2nd
WDR54
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
103323374
NCBI-ProteinID:
XP_008223588
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All DBs
Position
LG2:complement(34551192..34556635)
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AA seq
371 aa
AA seq
DB search
MANQSSSSYPILCASFNQDTSCFAIGTKDGFKIFDSNTGRLCYERAIGAFVIVEMLFSSS
LLAIVGAGEEPSLSPRRLCLFNTTTGTALRELNFLTSILAVRMNKKRLVVILQDKTYVYD
INSLGILDTIDTIPNLKGLCAFSPSLEGCFLALPASISKGSVLLYNVMDLHLHCEIDAHR
APLAAMALSSNGTYIATASEQGTIIRVHLVSEATKSYSFRRGTYPSTIYSLSFGPSTQLP
DILVGTSSSGSVHAFSLGFSIYQSRSKRSGSFLGSIIPGSVTDALDPAHHDVLHNAAPAG
VKSYAVIRKVDKVADTSTSEIVACRATISIITYNGYFQEYNLSINNQNEFSWSLEREFKL
LTVISDDAISS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcagtcctcctcttcttacccaatcctttgcgcttccttcaatcaagacacc
agttgctttgcaattgggacaaaggatggcttcaaaatattcgattccaatacagggagg
ctctgttacgaacgagctattggggctttcgttattgttgaaatgctatttagctccagt
cttcttgccattgttggagctggtgaagagccatctttatcgccacggcgtctctgtctc
ttcaacaccacaactggaactgctcttcgagaattaaattttttgacttcaatacttgct
gttcgcatgaataagaaaagacttgttgtcattttacaggacaaaacatatgtatatgac
ataaatagtcttggaatcttggacactattgatactattccaaatttaaaagggctttgt
gcattctctccaagtttggaagggtgcttcttggctcttcctgctagcatctccaaggga
tctgtgttgttgtacaatgtcatggacctgcatttacattgtgagatagatgctcatcga
gccccacttgctgcaatggctctttcttccaatgggacgtacatagcaacagcatctgaa
caggggaccattataagagtccatctagtctcagaagcaactaagtcttatagctttcga
agagggacatatccctcaactatatattctttgtcatttgggccatctacgcaactgcca
gatattcttgtgggcacaagttcttcaggttctgttcatgctttctctctggggttctct
atttatcaaagcagaagcaaaagatcaggaagttttcttggatcaattatacctggctct
gttacggatgcattggatccagcccatcatgatgtacttcataatgctgcaccagcagga
gtcaaaagctatgccgtgattcgaaaggttgacaaggttgctgatacatcaacttcagaa
attgtggcttgcagggcaactatttccattataacatacaatgggtacttccaggagtac
aacttaagcatcaacaatcagaacgagttctcatggagtctggagcgtgaattcaagcta
ctgactgtcatctcagacgatgccatcagctcctga
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integrated database retrieval system
