Prunus mume (Japanese apricot): 103323647
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Entry
103323647 CDS
T03196
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103323647
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
103323647
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
MOEP19
Motif
Other DBs
NCBI-GeneID:
103323647
NCBI-ProteinID:
XP_008223873
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Position
LG2:complement(37039830..37045283)
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AA seq
512 aa
AA seq
DB search
MATAQPTENGSAKVTEPDPQQPTSETTTASITVPESDQTATTATADNNPNQNPEPDSGPQ
PEPSAQEATTTVSGDATSIADKRWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEET
RARIRVLDGAVGTPDRIVLISGREEPEAPLSPAMDAVIRIFKRISGLADSEGDAKVSGPA
GVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQ
GEALKVLKAVEAVVAHLRKFLVDHSVLPLFEKTYNATISQERQPDTWADKSLLHTASQTG
VSTNYSLSAKRESLFLDRETQLESQLPSAGISLYGKDPSIYGKDPSIYGKDPSIYGQDSS
IYGQDPSLSSIRSSGIGRPGAPIVTQIAQTMQIPLSYAEDIIGVEGSNIAFIRRSSGAIL
TVQESRGLPDEITVEIKGTSSQVQMAQQLIQEVINNRKEPITSSYGRLDTGMRSSYSQLG
ASSYPSSSLPSQPYGGGYGSSGLGGGYSTFRL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcccagcccaccgagaacggctccgcgaaggttacggaacccgacccgcaa
caacccacatccgaaaccaccaccgcctcaataaccgtacccgagtccgaccaaacagcc
accaccgcaacggcagataacaatccgaaccaaaatcccgaacccgactccggtcctcaa
ccggagcccagcgcccaggaagctacaacgaccgttagcggcgatgccacctcaatcgcc
gataaaagatggccgggttggcccggggactgtgtgtttcggctaattgtgccggttctc
aaggtcggtagcattatcggccgaaaaggcgagctcattaagaagatgtgtgaggagacc
cgagctcgcattcgggtcctcgacggcgccgttggaactcctgatcgcatcgtgctgatc
tctggaagggaagagccagaggctcctctgtcccctgctatggatgctgtaataagaata
tttaaacgtatctctggcttagctgatagtgagggtgatgcaaaagtgtccggtcctgct
ggagttgcattctgttccatccgcttgttggtagcatccacacaagcaattaatttaatt
ggaaaacaagggtcattaatcaaatctatacaggagagtaccggggcttctgtgcgagta
ttgtctggggatgaggttccattctatgctgctgcagacgaaaggattgttgaattgcag
ggagaagctttaaaggttctcaaagctgtagaagcagtagtggctcacctgaggaagttt
ttggttgatcatagtgttcttccactttttgagaagacgtacaatgcaaccatctcacaa
gagcgccaaccagatacctgggctgacaaatcgttgctgcatactgcttctcaaacggga
gttagcactaattattctctctcagcaaaaagggaatctttgtttttggatcgtgaaact
caattagaatcacaactcccttccgctggcatttcactttatggaaaagatccttctatc
tatggaaaagatccttctatttatggaaaagatccatctatttatgggcaagattcttct
atttatggacaagatccttctctttcttctatccgttcttcagggattggtcggcctggt
gctcctattgttactcagattgcacaaacaatgcaaattcctctatcttatgccgaggac
attattggggttgaaggttcaaatattgcattcattcgccgtagtagcggagccatctta
actgtgcaagagagcaggggactacctgatgaaattaccgtagaaataaaaggcacctca
tcacaggttcaaatggctcagcaactgattcaggaagttataaacaatcgcaaggaacca
attacaagtagctatggcaggctagatactggaatgaggtcatcctacagtcagttaggt
gcttcatcttacccttcatcttcattaccgtcacaaccgtatggtggtgggtatggatct
tctggtctgggaggaggctacagcactttcaggctttga
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