KEGG   Prunus mume (Japanese apricot): 103323669
Entry
103323669         CDS       T03196                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103323669
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmum03041]
    103323669
Spliceosome [BR:pmum03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103323669
 Complex B
    103323669
 Complex C
   U2 SnRNP specific factors
    103323669
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin MBDa
Other DBs
NCBI-GeneID: 103323669
NCBI-ProteinID: XP_008223900
UniProt: A0ABM0NF86
LinkDB
Position
LG2:37239375..37244588
AA seq 804 aa
MIGSILPLPAPPSDGDLGPLPESQVTEPNNDEKQLNEEQNKANSVATHTRAIGIIYPPQD
IRNIVDKTSQFVAKNGPEFEKRIIANNTGNAKFSFLISSDPYHAYYQHRLSEFRAQNQSS
GQQPSLQLEDSATPESAPPAPAADGETGAPKLDPSAQFKSVLKVPEPPEKPEAEQYTVRL
PEGITGEELDIIKLTAQFVARNGKSFLLGLTNRETNNPQFHFLKPNHSMFTLFTSLADAY
SKVLMPPTGLTEKLKKSIADMTTVLERCVHRLEWERSQEQARQKEEDEIELERMQMAMID
WHDFVVVESIDFADDEDEDLPPPMTLEEVIRRSKVTDMEEDIVEPGKEVEMEMDVEEMQL
VEEGLRTARIEENGVEKKNENKVTDDPDPPMRIVKNWKRPEDRIPAERDPTKYVISPITG
ELIPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGT
TEEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQAMSQNINGEDQNDVLNNDARN
LPGPAAPPPRPGVPSVRPLPPPPGLALNLPRVPPNTAQYSAPSSGGLPVPPPRPSVVQYQ
SVRPPGPPMPMSSGQQSLLVNRPPPMPPSMSMNPSVPPPPGSQFTPMQVPRSYMPLPVPP
PTMQMMPPPPLPQGMPPPPPPEEAPPPLPEEPEPKRQKLDDSMLISEDQFLAQHPGPVRI
TVSVPNVDEGNLKGQLLEITVQSLSETVGSLKEKISGEIQLPANKQKLSGKPGFLKDNMS
LAYYNVGAGEALSLSLRERGGRKR
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgataggttccattttgcccttaccggctcctccttctgatggagaccttgggcctctt
ccagaatcccaagtgactgaacctaataacgatgagaaacaattgaatgaggagcagaac
aaagccaactccgttgcaacacatactagggctattggtatcatttatcctcctcaagac
atcagaaatattgttgacaaaacttcccaattcgtggcaaagaatggaccggagtttgag
aaaaggatcatagctaataataccggaaatgcaaagttcagctttttgatttcctcagat
ccctaccatgcatattatcagcatcgattgtctgagttccgtgcccagaatcagtcttct
ggacagcaaccttctttgcagcttgaagattctgcaacacctgagtcagccccaccagct
ccagctgcagatggtgaaacaggagcaccaaagctggatccctctgctcagtttaaatcg
gtgctcaaagtgcctgaaccaccagaaaaacccgaagctgagcagtatactgttcggctt
cctgaagggattactggggaagagttggatattataaagctcacagcccagtttgtagct
cgaaatgggaaatcatttttgttaggattgacaaacagggaaacgaataacccccagttc
cattttttaaaacctaaccatagtatgtttacacttttcacttctctggctgatgcttac
tcaaaggtgttgatgcctccgacggggttgacagagaagcttaagaaaagtattgcagac
atgacaacggtgcttgaacggtgtgtgcatcggctggagtgggagcgttcacaagagcag
gcaaggcagaaggaagaagatgagattgagctggaaaggatgcaaatggctatgattgat
tggcatgattttgttgtggttgaatcaatagactttgcagatgatgaggatgaggattta
cctcctccaatgacccttgaggaggttataaggagaagcaaggtcacagatatggaagaa
gatattgttgagcctggtaaggaggtggaaatggaaatggatgtagaagagatgcagctt
gttgaagagggcttgaggacagccagaattgaagagaatggtgttgaaaagaagaatgag
aataaggtgacagatgatccagatccaccaatgagaattgtgaagaactggaagagacct
gaagacaggatccctgctgaaagagacccaacaaagtacgtcatttcaccaatcactgga
gagcttatccctatcaatgagatgtctgaacacatgaggatttctctcattgatccaaaa
tacaaagagcaaaaagaacggatgtttgccaagattcgagagactactctcgcccaggat
gatgaaatctcaagaaacattgtgggccttgcacgaacccgtcctgatatttttggtacc
acagaggaagaagtttctaacgctgtcaaggctgagattgaaaaaaagaaagatgagcaa
ccaaagcaggtcatatgggatggtcacactggaagcattggccgcacagcaaatcaagcc
atgtcacagaatatcaacggagaggatcagaatgatgttcttaacaatgatgcaaggaat
cttcctggtcctgcagctcctcctccaagacctggtgtgccgtctgttcgccctctaccc
ccaccaccaggtcttgccttgaatctacctcgtgttcctccaaatacagcgcagtattct
gctccatctagcggtggcctccctgtacctccaccgaggccatcagttgtccaatatcaa
tcagttcgaccacctggaccaccaatgcccatgagttcaggacagcaatcccttttggtg
aatcggccacctcctatgccaccatcaatgtctatgaatccatctgtaccacctccacct
ggttcgcagtttacacccatgcaagttccccgatcttatatgcctcttcctgttcctcca
cctacaatgcaaatgatgccaccaccacctttgcctcaggggatgcccccgccaccacca
cctgaggaagctcctccaccgcttccagaagaacctgagccaaagcggcagaagcttgac
gattctatgcttatttcagaagatcagtttctggcacagcatccgggacctgttcgcatc
acagtatctgtccccaatgttgatgaaggtaatctgaagggacaacttttggagattacg
gtgcagtccttatctgaaactgttgggagtctgaaagaaaaaatttctggggagatccag
cttcctgcaaacaaacagaaattgagtggaaagcctggttttctcaaggacaatatgtcg
cttgcgtattataatgttggagcaggagaagcacttagtctttcattaagagagcgtggt
ggaagaaagagatga

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