Prunus mume (Japanese apricot): 103323742
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Entry
103323742 CDS
T03196
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103323742
Enzymes [BR:
pmum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103323742
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
103323742
NCBI-ProteinID:
XP_008223974
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All DBs
Position
LG2:complement(37733092..37737993)
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AA seq
445 aa
AA seq
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MAVFESKRWVTGAFLAVLLVLCFVAAIAEISGNRNGGTEELQSSSNSSMAARVAEDDESF
NKHAVDDPEEVVAMVDMSIRNSTERRKLGFFSCGTGNPIDDCWRCDPNWQKNRKRLADCG
IGFGRNAIGGRDGRFYVVTDPSDDDPVNPRPGTLRHAVIQNEPLWIVFKRDMVIQLKQEL
IMNSFKTIDGRGVNVHIANRACITIQFVTNIIIHGLHIHDCKPTGNALVRSSPSHFGWRT
MADGDAVSIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNHFTHHNEVMLLGHSDS
YTRDKAMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGN
RYAAPTNPFAKEVTKRVETPTTQWKSWNWRSEGDLLLNGAYFTPSGAGASASYARASSLG
AKSSTMVGAITSGSGALPCRRGHPC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtttgagagtaagagatgggttactggtgctttcttggcggtgcttctcgtg
ctttgcttcgttgctgcaattgctgagatctctggaaacagaaatggaggaacagaggag
ttgcagagctcaagcaactcatcaatggcggccagggtggctgaggatgatgagagcttc
aataagcatgcagttgatgacccagaggaggttgttgccatggttgacatgagtatccga
aacagcactgagagaaggaagctgggcttcttctcatgtggaactggcaatccaattgat
gactgctggcgttgtgatccaaactggcagaaaaaccgcaagcgtcttgcagactgcggc
attggttttggcagaaatgccattggtggtcgtgatggtcgcttctatgttgtcactgac
cctagtgatgatgatcctgtaaaccccagacccggtactcttcgccacgctgtcatccag
aacgagcctctctggattgtgttcaagcgagacatggtgatacaattgaagcaggagctc
atcatgaacagcttcaagaccattgatggccgcggagtcaatgttcacattgctaataga
gcatgcatcacaatccaatttgttacaaatatcataattcatggtctacatatccatgac
tgcaagcccacaggaaatgctttggtgaggagctctccatctcattttgggtggcggaca
atggctgatggtgatgctgtctccatcttcgggtccagccatatatgggttgaccacaat
tctctctccaactgtgctgatggtcttgttgatgctgtcatgggctcaactgcaattacc
atttccaacaaccactttacccaccacaatgaggtgatgctgttgggccacagtgactct
tataccagagacaaggcaatgcaagtgacaattgcttacaaccactttggggagggactt
atccaaagaatgccaaggtgtaggcacgggtattttcatgtggtgaacaacgactacact
cactgggaaatgtatgccattggtggaagtgcagagcccaccatcaacagccagggcaac
agatatgctgctccaaccaacccctttgcaaaggaggttaccaagagggtcgagacaccg
acaacccaatggaagagctggaactggagatcagaaggagacctgcttctaaatggtgcc
tacttcactccatccggagctggagcttcagcaagctatgccagggcctcaagcttggga
gccaagtcctctaccatggttggagccataacttcaggttctggtgcactcccctgccgc
agaggccatccatgctag
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