Prunus mume (Japanese apricot): 103323831
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Entry
103323831 CDS
T03196
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103323831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103323831
Membrane trafficking [BR:
pmum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
103323831
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
V-ATPase_G_2
Motif
Other DBs
NCBI-GeneID:
103323831
NCBI-ProteinID:
XP_008224075
UniProt:
A0ABM0NFM0
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All DBs
Position
LG2:complement(38612425..38626154)
Genome browser
AA seq
1107 aa
AA seq
DB search
MAAFVPPPGAPRPNNSNTPPPPNYNPNNAQRNPDSLADNMQNLNLNRQPNVPNSAPRPSP
FGQAPPFHSSAPPAGAPGAPPPFSRPGPPPTALARPAAPRSGPPQPVLPPATAPVRPTGP
PVGQPASFVSRPPPGSLPPVGGLAPASGPPPSPFQTSGLQSGPVSTPLPASGPRSGPGSL
PLGQSMPPSSGPGRMMSNGPPMFASGAMPGGPRFPPPGNSPQPPVGHPPAMATTSGPPRT
PTMHSMLGGPAVSAXPXXXXXXXXXXXXFSAASQAMRPPPGSPYGSQPWPMQQGQVAPPS
QFPGSAQPPRMFGMPPPPLPNQSMTTISPAVGQTGAPLAGSSKIDPNQIPRPVPSSSVLI
HETRQSNQANPPPPATSDYIVRDNGNCSPRYMRCTINQIPCTADLLTTSGMPLSLLVEPF
ALPHPSEEPIQVVDFGESGPVRCSRCKGYINPFMKFIDQGRRFICNLCGFTDETPRDYHC
NLGPDGRRRDADDRPELCRGTVEFVASKEYMVRDPMPAVYFFLIDVSMNAIQTGATAAAC
SAINQVIADLPEGPRTMVGIATFDSTVHFYNLKRALQQPLMLIVADVQDVYTPLETDVVV
QLSECRQHLEQLLDSIPNMFQNSKIAESAFGAAIKAAFLAIKSTGGKLLVFQSVLPSTGI
GALSAREAEGRANISSAEKEAHKLLQPADKTLKTMAIEFAEYQVCVDLFITTQSYIDIAS
IAVIPRTTGGQVYYYYPFSAVSDPAKLYNDLRWNVTRPQGFEAVMRVRCSQGIQVQEYHG
SFCKRIPTDVDLPGIDCDKTIMVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVTTLS
LPCTSMLSNLFRAADLDTQFACFMKQAANEIPLSALLRVREQVTNLCISSLLSYRKFCAT
VSSSGQLILPEALKLLPLYTLALIKSTGLRTEGKIDERSFWINHVSSLSVPLAVPLVYPR
MVAIHGLDSKKEGDESPIPPVIPLSSEHVSDEGIYLLENGEDCFIYFGNLVDSSILQQLF
GVTSADELPTQYVLQQYDNPLSKKLNEVVNEIRRQRCSYLRLKLCKKGDPSGTLFFSYMV
EDQSPNGPSYVEFLVHVHRQIQIKMAS
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttttgtgcctcccccaggggcacccaggcccaataacagtaacaccccacca
ccccctaattacaaccctaacaatgctcagagaaaccctgattcattagcagataatatg
cagaatttgaatcttaataggcagcctaacgtgcctaattctgcccctagaccatcccct
tttggccaagcaccacctttccattcatcagcccctcccgctggggctcctggcgctccg
cccccgttttctcggcctggccctccccccactgcacttgcacgacctgcagcacctcga
tcaggacccccacaaccagtattaccccctgccaccgccccagtaagacccactgggccg
cctgttggccagcctgcatcttttgtgtctagaccgcctcctgggtctttgccccctgtg
ggtgggttagctcctgcttctgggccacctcctagtcctttccagacatcaggtttacag
agtggtccagtttcaacaccgctaccagcatcaggtcctcgctcagggcctgggtctttg
ccgttgggtcagagcatgcccccttcgagtggaccaggtagaatgatgagtaatgggcca
ccaatgtttgcttccggggctatgccaggtgggccccgttttcctcctcctggaaattca
cctcaaccacccgttggacatccaccagcaatggcaacaacatcaggtcctcctcgaact
ccaaccatgcactctatgctgggtggcccagcagttagtgctnccccaannnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnttttcggcagcatctcaagccatgcgtccacctcca
ggttctccctatggctcacagccatggccgatgcaacaagggcaggtggctccaccttca
caatttcctggttctgctcaaccacctagaatgtttggaatgccacccccaccactacca
aatcagtccatgactaccatctcacctgctgttggtcaaactggagcacctttggctgga
tcatcaaagatcgatcccaatcaaattcctcggcctgtaccaagttcgtcggtgctcatt
catgaaactcgtcagagcaatcaggcaaatccacctccgcctgctacaagtgattatatt
gttagagacaatgggaattgcagtcctcgttacatgaggtgcaccatcaatcagatacca
tgcactgctgatcttttgacaacatcagggatgccgttatctttgttggttgagcctttt
gcccttcctcatccatctgaggaaccaatccaagttgtggattttggtgaaagtggtcct
gttcgatgttctcgttgcaaaggctacataaatcctttcatgaagtttattgaccaaggc
aggcgattcatctgtaacttatgtggatttactgatgagactccccgtgactaccactgc
aatctgggtccagatggtaggcgcagagatgctgatgataggccagaactatgtagagga
acagttgaatttgttgcttcaaaagaatacatggtgcgtgatcctatgccagctgtgtac
ttcttcctcatcgatgtatccatgaatgccatacaaactggtgcaactgctgcagcttgc
agtgcaatcaatcaagttattgctgatctacctgaaggtcctcggacaatggtgggaatt
gcgacttttgactccacagtccatttttacaatttgaaacgcgcgctacagcagcctttg
atgcttattgttgctgatgtacaagatgtttacactcctttggagactgatgtagttgtt
caactttccgagtgccgtcaacatttggagcaattgttggacagtattccaaacatgttt
caaaacagtaaaattgctgaatcggcctttggtgcagcaatcaaggctgctttcttggca
ataaagagtactggagggaaacttttggtgtttcagtcagttttgccatcaactggaatt
ggagccctttctgctagagaagctgaaggaagagctaacatatcttcagctgagaaggag
gcccataaattactccagccagcagacaaaactttaaaaactatggcaattgagtttgct
gaatatcaggtttgtgtcgacttatttatcactacccagtcatacatagacatcgcttct
atcgctgtcatcccaagaacaactggagggcaggtttattattattaccccttctcagct
gtctctgatcctgcaaagctctacaatgatcttagatggaatgtcacaaggccccaagga
tttgaggcggtgatgcgtgtaagatgcagccagggcattcaagttcaagagtaccatgga
agcttttgtaaacgtattcctacggatgttgacctacctgggattgactgtgacaaaact
attatggtgaccttaaaacacgatgataagttacaggatggctcagaatgtgctttccag
tgtgcccttttatacacgactgtgtatggccaacggagaattcgagttacaacgttgtct
ctgccatgcacaagtatgctaagtaatctgtttcgtgctgctgacttggacactcaattt
gcatgtttcatgaagcaagcggcaaatgaaattcctttaagtgccctcttgcgtgtacgg
gaacaagtgacaaatctgtgcatcagtagtctgctttcatatcgtaaattctgtgctact
gtatcatcttctggacagcttattcttccagaggcactgaagctcctgcctctttacacc
ctcgcattaatcaaaagtacggggctacgaactgaaggaaaaatagatgaacggtccttc
tggatcaaccatgtttcttccctttctgttcctttggcagtgccactggtttaccccaga
atggtggctattcatggccttgactctaaaaaggagggtgacgaatctccaattcctccg
gtgattccgctttctagcgaacacgtgagtgatgaaggaatttatcttcttgagaatggt
gaggactgttttatatattttgggaacttggtggattccagcattttgcaacaacttttt
ggcgtcacctctgctgatgaacttcctactcagtatgtgctgcagcagtatgataatcca
ttatcgaagaagctgaatgaagtggtaaatgaaatacggcgccagagatgttcctacctt
cgcttaaaattgtgtaagaaaggagatccatcaggaacattatttttctcttatatggtc
gaagaccagagccccaatggcccctcctatgttgagtttctcgtacatgtccatcggcaa
atacagataaaaatggcgtcatga
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