Prunus mume (Japanese apricot): 103323936
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Entry
103323936 CDS
T03196
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103323936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103323936
Membrane trafficking [BR:
pmum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
103323936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
103323936
NCBI-ProteinID:
XP_008224182
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Position
LG2:complement(39138452..39141741)
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AA seq
782 aa
AA seq
DB search
MDFVELEAIEGLRWCWNSWPASKTESTDLVIPLSIMCTPLMQQAELPVLPYDPVTCRQCG
AVLNPYARVEYTSRIWFCSFCLHKNSFPHSYSNIGETNLPAELFPTYSAVEYAKTANPVA
NSGPNHNWANGLSSSSLSLSSMVSTAPSSLPDGDPRGVRPAFVFVVDACTSGEELGALKN
ELLLVVEQLPETALVGLVTFDSMVRVHDLGFSECSRAVVFHGARELSSHQTQQFLGIKRP
TYQQLGKMSVNQKQGFLVPVSECEFNITTAIEEIHSSLLGKPGHRPLRSTGVAISAAVGL
LEGCSVSTGSRIMVFTSGPATLGPGIIVDSNLGNSIRTHRDLINGHTPYYGRSCSFYRQV
SQRLTDASIVLDLFACSLDQAGVAELKAPVESSGGFMMLGESFASNQFRKCLRHIFTHDE
EGYLKMYLDATIEIVTTKDVKICGALGPCVSLRKVNNLVSSSEIGEGGTYVWKLGTITNK
TCIAFFFQVSNEQNVQPGSAFFIQFITRYRYGNMGVRKRVTTAARRWVGNRSPEIAAGFD
QEAAASVIARLAIHRAETCFARDVIRWLDDTLIQFASKFGDYAEEDPSSFRLTSNFSLFP
QFMYYLRRSQFIDVFNCSPDETAFFRLMLNREGVVGSLIMIQPTLFQYSFDGPPVPVLLD
VRSISPDVILLFDSYFHVVIHYGSKIAQWRKLGYDKDPNHENLRKLLEAPEIDAEQLVAD
RVPAPRLIKCDQHGSQARFLLAKLNPSVTQNSTYSNGSDIIFTDDLSLQVFLDHLQVLAV
QG
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgtggaattggaggcaatcgaaggcctccgatggtgctggaactcatggcca
gcttcaaaaaccgagagcacagatctagtgatccctttgagcatcatgtgcacgccattg
atgcaacaagctgagctcccagtacttccctacgacccagtcacttgccgccaatgcggc
gccgtattgaacccatatgcccgggtcgaatacacgtctcgcatctggttctgctcgttt
tgcctccacaagaactccttccctcactcttactctaacatcggagagacaaatctcccc
gcagagcttttcccgacttacagcgcagtcgagtacgccaaaaccgcgaacccagttgcg
aattccggccccaaccacaactgggcaaatgggttgtcctcgtcttccttgtcgttgtcg
tctatggtgtcgacggcgccctcttctctgccggatggagatccgagaggggtcagaccg
gcgtttgtgttcgttgtagacgcctgtacgtctggggaggagcttggggctctcaaaaat
gagctcttgcttgttgtggagcaactcccagagactgctttggtgggtctggtcacgttt
gattcaatggttcgagttcatgatcttgggttttcggagtgctcgagggccgtggtgttt
cacggagcacgggagctttcatcacatcagacccaacaatttctgggcattaaacgacca
acataccagcaactcggaaagatgtcagttaatcaaaagcagggctttttggtaccggta
tctgaatgtgagttcaacatcactactgcaattgaagagatccattcttcacttctaggc
aagcctggccatcgcccactaaggtctacaggagtagcaatatcagctgcagttggactt
ctggaaggatgctctgtgagcacgggctccaggatcatggtcttcacttctggacctgca
actttgggtccaggaattattgttgattcaaatctaggcaattccatcagaactcaccga
gacctcatcaatggtcacacaccttattatggtagatcttgcagcttctataggcaagtg
tcgcagaggttaactgatgcatctattgttctcgatttgtttgcttgttctcttgatcaa
gctggagtggcagagctgaaagcccctgttgagagttccggtggtttcatgatgctaggt
gagtcatttgcgtcaaatcaattcagaaaatgtttgcgccacatttttactcatgacgaa
gaggggtatttgaagatgtatttggatgctactattgagatagtgaccactaaagatgtt
aaaatctgtggagccctaggtccttgtgtatctcttcggaaagtcaacaatttagtgagt
agcagtgagattggggagggtggtacctacgtgtggaagttgggtacaatcaccaataaa
acatgcattgcttttttcttccaagtgagtaatgagcagaatgttcaacctgggtcggca
ttcttcatacagttcataacacgataccgatatgggaacatgggagtccggaaaagggtg
acaactgctgcaagaagatgggttgggaaccgttcaccagaaattgctgctgggtttgat
caagaagcagcagcctcagtgatagccagacttgctattcaccgagccgagacttgtttt
gctcgagatgttatcagatggctggatgacacgttgatccaatttgcttccaaatttgga
gactacgctgaggaagatccatcttctttccgcttgacatccaacttctccctgtttcct
caattcatgtattacttgaggaggtctcagtttattgatgtctttaattgtagtccggat
gagacagctttcttccggctgatgctgaatcgtgagggggtggtgggttctcttatcatg
atccaacccacacttttccaatattcctttgatggtccacccgttcctgtcctcctagat
gtccgctccatatctccagatgttattttgctctttgattcatacttccatgtggttatt
cattacgggtccaaaattgctcaatggaggaagcttgggtatgacaaggacccaaaccat
gagaatttgaggaagctgttggaagccccggaaatagatgcagagcagttggtggctgac
cgagttcctgcacctaggcttattaaatgtgaccagcatggtagccaggcaaggtttctt
cttgcaaagttgaatccatctgttacccaaaattcaacatactctaatggctcagatatt
atttttactgatgatttgagcttgcaagtatttttagatcacttgcaggtcctggcagtg
caaggctga
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