KEGG   Prunus mume (Japanese apricot): 103324215
Entry
103324215         CDS       T03196                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103324215
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    103324215
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN UBA_RAD5A zf-RING_UBOX zf-C3HC4_3 zf-C3HC4 zf-C3HC4_4 ResIII zf-C3HC4_2 zf-RING_2 DEAD Prok-RING_4 zf-RING_5 RING_XB3-XBAT31 HDA2-3 zf-RING_4 zf-ANAPC11 zf-RING_10 DMAP1 U-box
Other DBs
NCBI-GeneID: 103324215
NCBI-ProteinID: XP_016647194
LinkDB
Position
LG2:40798631..40805145
AA seq 1195 aa
MDTRNGAEEEKVSSVEMPKFEIPTAVIVKRTNTSTGARISAPINQEGSKAADETEAQRIV
KEEVPDSEEGLVTLAQLPDPTSTHIKQESSEKSDMAETLSGLNPPSLVKTEVPDSQEGLI
QQAKPVPIPVKQEPFVESDEANPLSLVPSQVPDSQEGLVLRVEPITTLVKLEASEEADEA
EKLHGSKPELPEKKEVPDQQECLTPQEENVKKIRAVVGSEISEILIQLVLYRCGDNPDAA
INYILEGQGISVKRTNTSPGACISTQLPDSHKGLKPNSQVKKEDPDCQVTLVQQTRPKNL
EDGDFPTEQDWLLVGRTFVTALSTSKGRKLFDNEIVHFSFPSANSSHKTKWIVRFSTKQF
GEIGRLPMEWAKCVIPLVNSGKVKLRGRCIAAPKVLSMMQEVILYVSFYIHHSIFTEGDH
SSWRLDVSPNIVSSIYPLLSQFKLLKIQPYKKAEFTPEELDSRKRLLNIERIPDDGAPVL
PLVKRRKGCQQPSEESRDEQAITESSLNKIVGAADVYDLEEMEPPSTLTCVLKPYQKQAL
YWMSELEKGIDVEKATQTLHPCWAAYHMCDERVSSVYVNIFTGEATTKFPTATQMARGGI
LADAMGLGKTVMTIALILARPGRSSNSIEIAKRRRIDSDTSTPFKPRGGTLVVCPMSLLS
QWKDELETHSESESISIFVHYGGYRSTDPKVISVQDVVLTTYGVLSTSYKSDGENSIFHQ
IDWYRVVLDEAHSIKSSKTQVAQAAFALSSHCRWCLTGTPIQNNLEDLYSLLCFLHVEPW
CNWAWWSKLIQRPYESGDPRGLRLIKAILRSLMLRRTKETKDKKGRPILVLPPTDIQTIE
CEQSEAERYFYDALFRRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPYLVMSSAD
SQKIKSRSDPQKFADLDDLASRFLEANRDASTSKQIVPTQAYVEEVVESIRRGENKECPI
CLELADDPVLTPCAHKMCRECLLSSWQTPATGRCPICRQWLKYTDLIACPSESRFQANTE
GNWTESSKVLKLLDCLEHILRSDSGAKSIVFSQWTAFLDLLETPMKKRGIGFLRFDGKLS
QTQRERVLNEFNETRQKMVLLTSLKTGGVGLNLTAASNVFIMDPWWNPAVEEQAIMRIHR
IGQKRTVVVRRFIVKDSVEERMQQVQARKQKMIAGALTDEEVRSARIEELKMLFT
NT seq 3588 nt   +upstreamnt  +downstreamnt
atggacaccagaaacggcgcagaggaagagaaagtctcatcagttgaaatgcccaaattt
gaaattcctacagcggtgattgttaagcgaaccaatactagcactggggctcgtatttca
gccccgatcaatcaagagggctccaaggcagcagatgagaccgaagctcagagaatagtg
aaggaagaagttcctgatagtgaagagggtttggtaactttggctcaactgccggatcct
acttccacccatatcaagcaagagagctccgagaagtcagatatggctgaaactctttct
gggttgaaccctccaagcttggttaagactgaggttcctgatagccaggagggtttgatt
cagcaggcaaaacctgttcctattccggtcaagcaagagccctttgtggagtcagatgag
gccaatcctctaagcttagtaccgagtcaagttcctgatagtcaagagggtttggtccta
cgagtggaacccattacgaccctggttaagctggaggcctctgaggaggcagatgaagcc
gaaaagcttcacgggtctaagcctgagctcccagaaaagaaggaagttcctgatcagcaa
gagtgtctgaccccacaggaagagaatgtcaagaaaatccgagcagttgtggggtctgaa
atatccgaaattttaattcaactagtactctatcgatgcggtgacaacccagatgcagcc
atcaattacatcctcgaaggtcaggggatatcggttaagcggacaaatacgagcccaggg
gcttgtatctcaacccagttgcccgattcgcataagggattgaagcctaatagccaggta
aagaaggaagatcctgattgtcaagtaactttggttcaacagacgaggcctaaaaatttg
gaggatggagacttccccacagagcaggattggcttttggtgggaaggacatttgtcact
gcactttctacttccaaaggcaggaaattgtttgataatgagattgttcatttctctttt
ccttccgcaaactccagccacaaaaccaaatggattgttcgtttctcaaccaagcaattt
ggagagattggtcggcttcccatggaatgggcaaagtgtgttattccgcttgtaaattct
ggtaaagttaaacttcgtgggcgttgtatagctgcaccgaaagtcctttctatgatgcaa
gaggtcatattgtatgtaagtttttatattcaccactcaattttcacggagggtgaccac
tcgtcgtggaggctagatgtatcccccaatattgtttcttcaatttatcctctcctcagt
cagttcaaattgctgaaaattcagccatataagaaggctgaattcaccccagaagaactt
gattcccgaaaacgccttttgaatattgaacgtattccagacgacggtgctcctgtgttg
cccttagtgaaacgaagaaagggttgccaacagccttcagaagaaagcagagatgaacaa
gccattacagaatcatctctaaataagattgttggtgcagcagatgtttatgacttggag
gagatggaacccccaagtactctcacgtgtgttctgaaaccataccagaaacaagctctc
tactggatgtctgaattagagaagggaattgatgttgagaaggcaacacaaactcttcat
ccttgctgggcggcctatcatatgtgtgatgagagggtttcttcagtctatgtgaacatc
ttcacgggagaggcaaccacaaaatttccaactgcaacacagatggcaagaggaggaatc
ctagcagatgcaatgggacttgggaagactgtgatgacaattgctctaatacttgcaaga
ccaggcagaagctctaatagtattgaaattgcaaagaggaggaggatagattcagataca
agcaccccatttaaaccaaggggaggcactcttgttgtctgtcccatgtctttgttaagc
cagtggaaggatgagcttgaaacccattcagagtcggaaagcatttccatttttgtccac
tatggtggatacagatccactgaccccaaggtgatatcagtacaagatgtagtcttgaca
acatatggtgtcttgtctacatcttataaaagtgatggggagaacagcattttccaccag
atcgactggtatagggtggtgcttgatgaagcacatagcattaaatcttcaaagacccaa
gttgctcaggctgcttttgccttgtcctcccattgtcgttggtgtttgacaggaacgcct
attcagaataatttggaagacctctacagcctcttatgcttcttgcatgttgaaccatgg
tgcaactgggcatggtggagtaaattaattcaacgaccttatgagagtggtgaccctaga
gggctgagattgataaaggctattttgaggtcattaatgttaagaagaacaaaggagaca
aaggataaaaaaggaaggcccatacttgttctccctccaactgacattcaaaccattgag
tgtgagcagtcagaagctgaacgctacttttatgatgccctttttaggagatcaaaagtc
cagtttgatcagtttgtggcacaaggcaaggttcttcacaactatgcaaatatccttgag
ctactactccgattgaggcagtgttgcaaccacccatatcttgtgatgagtagcgctgat
tcacaaaagataaaaagtcggagtgatccccaaaagtttgcagacttggacgaccttgct
agtagattccttgaagctaatcgtgatgcttccacttcaaagcagattgtccccacccaa
gcctatgttgaagaggttgttgagagtatacgtcggggtgaaaacaaagagtgtcccata
tgcttggagcttgcagatgatcctgtacttacaccatgcgcgcataagatgtgcagggag
tgtcttctctcaagctggcagacaccagctactggtcgatgtccaatatgtcggcaatgg
ctcaaatacactgaccttatagcctgcccatcagaaagccgtttccaggctaatactgag
ggaaattggacggaatcttcaaaggttttaaagctcttggattgcttggaacatatcctt
cggtcagattctggtgcaaagagcattgttttcagtcagtggactgcatttttggatctg
ttggagacccctatgaagaaaagaggaattgggtttctgaggtttgatggaaagctgtcc
cagacacagagagaaagggtattgaacgagttcaatgagaccaggcagaaaatggtgttg
ttgacgtctttgaaaactggtggtgttggtctaaatttaactgcagcatctaatgtcttt
ataatggatccatggtggaatccagcggttgaggagcaagcaataatgagaattcatcgc
attggacaaaagcgaactgttgttgttagaagatttattgtcaaggactcagtggaggaa
cgcatgcaacaagttcaggccaggaagcaaaagatgattgctggagctctcactgatgag
gaagtaagatctgccagaattgaggagctcaaaatgcttttcacatag

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