Prunus mume (Japanese apricot): 103324426
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Entry
103324426 CDS
T03196
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103324426
Enzymes [BR:
pmum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103324426
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103324426
NCBI-ProteinID:
XP_008224702
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Position
LG3:complement(425518..426906)
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AA seq
385 aa
AA seq
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MASLSPLILLSCFLTYYIAPTSQAYSPGYYTTTPKTTMNVVDSCWRSKSNWAINRRALAN
CAVGFGQDTVGGKYGSTYIVTNSYDDPINPQPGSLRYGVIQTQPLWIVFAKDMVITLKNE
LIMNSFKTIDGRGAKVEIAYGPCITVQGVSHVIIHGISIHDCKPGKGGNVRSTPTHVGHR
RGCDGDGISIFASSHVWVDHCFLARSSDGLIDVTHASTAVTITNNYFSQHDKVMLLGHND
NFSADKGMKVTIAFNRFGAGLIERMPRVRFGYAHVANNRYDEWKMYAVGGSANPTIFSEG
NYFIAPDTAYAKQVTKRESGGRWNNWKWRSSRDVFKNGAFFVQSGYGSCYPLYSKTQSFK
VLDGSMVPALTSSAGPLRCFVGKAC
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttatcccctctcatattgctctcatgttttctaacttactacattgctcca
acatctcaagcctattcaccgggctactacaccacgacccccaaaaccaccatgaacgta
gtcgactcatgttggcgttccaagtccaattgggccattaaccgccgcgctttggccaac
tgcgcagtaggctttggccaagacacggtgggaggaaaatatgggagtacttacattgtc
accaactcatacgatgaccccataaaccctcaacctgggtcactccgttacggggtgatc
caaacgcagccactgtggatcgtctttgccaaggacatggtgatcacactaaaaaatgag
ctcattatgaacagctttaaaaccatagatggtcgaggagctaaagtggaaattgcctac
ggaccatgcataacggtgcagggcgttagccatgtgattatacatggaataagtattcat
gattgcaagccagggaagggtggaaatgttaggagcacccctacacatgtagggcaccgg
cgaggatgcgatggagatggcattagtatctttgcttcttcgcatgtttgggttgaccat
tgcttcctagcacgtagcagcgatggcctcattgatgtcacccatgcttccaccgccgtc
accatcactaacaactatttctctcagcatgataaggtgatgctgcttggacacaatgat
aattttagtgcagataaaggtatgaaagtcacaatagcctttaaccgttttggggctggc
ctgattgaaaggatgccacgggtgaggtttgggtatgctcatgtggccaacaatagatat
gacgagtggaagatgtacgcggttggaggcagcgctaacccgaccattttcagtgaaggg
aactacttcatagcgcctgatactgcttacgcaaaacaggttacaaagagagagtctgga
ggacgttggaataattggaaatggagatcttccagggatgtgttcaaaaatggtgctttt
tttgttcaatctggatatggaagctgttacccactttactctaaaactcagtcgtttaag
gtcctagacggatccatggttcctgctttaacttcaagtgcgggtcctctgcgctgcttt
gttggtaaagcatgttaa
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