Prunus mume (Japanese apricot): 103324495
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Entry
103324495 CDS
T03196
Name
(RefSeq) polyubiquitin-A
KO
K08770
ubiquitin C
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103324495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103324495
Ubiquitin system [BR:
pmum04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
103324495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
103324495
NCBI-ProteinID:
XP_016648325
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All DBs
Position
LG3:745960..750455
Genome browser
AA seq
1065 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS
DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagtcatct
gacaccatcgacaatgtcaaggctaagatccaggacaaggagggcatccctccagaccag
cagcgtctcatcttcgctggaaagcagctcgaggacggccgtaccctcgctgactacaac
atccagaaggagtcaaccctccacctggtgctccgtctgcgtggtggcatgcagatcttc
gtcaagaccctcaccggcaagaccatcacccttgaggtcgaaagctccgacaccattgac
aacgtcaaggccaaaattcaagataaggaaggtatccccccagaccagcagaggctgatc
ttcgccggcaagcagctggaggatggccgtaccctcgcagattacaacatccagaaggag
tcaaccctccacctggtgctccgtctgcgtggtggcatgcagatcttcgtcaagaccctc
accggcaagaccatcacccttgaggtcgaaagctccgacaccattgacaacgtcaaggcc
aaaattcaagataaggaaggtatccccccagaccagcagaggctgatcttcgccggcaag
cagctggaggatggccgtaccctcgcagattacaacatccagaaggagtcaaccctccac
ttggtgctccgtctgcgtggtggtatgcagatcttcgtcaagaccctcaccggcaagact
atcaccctggaggtcgagagctccgacaccattgacaacgtcaaggctaagattcaagat
aaggagggcatcccaccagaccagcagaggctgatcttcgccggaaagcagctcgaggat
ggccgtacccttgctgactacaacatccagaaggagtccactctccatttggtgcttcgt
ctccgtggtggtatgcagatttttgtcaagaccctgacgggaaagaccatcactctggag
gtcgagagctcggacaccattgacaatgtcaaggcgaagatccaggacaaggagggtatc
ccaccagaccagcaaaggttgatctttgcagggaagcagctcgaggatggccgtaccctt
gctgactacaacatccagaaggagtccacgctccatttggtgcttcgtctccgtggtggt
atgcagatcttcgtgaagaccctgaccggaaagactatcactttggaggtcgagagctcg
gacaccattgacaatgtcaaggcgaagatccaggacaaggagggtatcccaccagaccag
caaaggttgatctttgcagggaagcagctcgaggatggccgtacccttgctgactacaac
atccagaaggagtccacgctccatttggtgcttcgtctccgtggtggtatgcagatcttc
gtgaagaccctgaccggaaagactatcactttggaggtcgagagctcggacaccattgac
aatgtcaaggcgaagatccaggacaaggagggtatcccaccagaccagcaaaggttgatc
tttgcagggaagcagctcgaggatggccgtacccttgctgactacaacatccagaaggag
tccacgctccatttggtgcttcgtctccgtggtggtatgcagatcttcgtgaagaccctg
accggaaagactatcactttggaggtcgagagctcggacaccattgacaatgtcaaggcg
aagatccaggacaaggagggtatcccaccagaccagcaaaggttgatctttgcagggaag
cagctcgaggatggccgtacccttgctgactacaacatccagaaggagtccacgctccat
ttggtgcttcgtctccgtggtggtatgcagatcttcgtgaagaccctgaccggaaagact
atcactttggaggtcgagagctcggacaccattgacaatgtcaaggcgaagatccaggac
aaggagggtatcccaccagaccagcaaaggttgatctttgcagggaagcagctcgaggat
ggccgtacccttgctgactacaacatccagaaggagtccacgctccatttggtgcttcgt
ctccgtggtggtatgcagatcttcgtgaagaccctgaccggaaagactatcactttggag
gtcgagagctcggacaccattgacaatgtcaaggcgaagatccaggacaaggagggtatc
ccaccagaccagcaaaggttgatctttgcagggaagcagctcgaggatggccgtaccctt
gctgactacaacatccagaaggagtccacgctccatttggtgcttcgtctccgtggtggt
atgcagatcttcgtgaagaccctgaccggaaagactatcactttggaggtcgagagctcg
gacaccattgacaatgtcaaggcgaagatccaggacaaggagggtatcccaccagaccag
caaaggttgatctttgcagggaagcagctcgaggatggccgtacccttgctgactacaac
atccagaaggagtccacgctccatttggtgcttcgtctccgtggtggtatgcagatcttc
gtgaagaccctgaccggaaagactatcactttggaggtcgagagctcggacaccattgac
aatgtcaaggcgaagatccaggacaaggagggtatcccaccagaccagcaaaggttgatc
tttgcagggaagcagctcgaggatggccgtacccttgctgactacaacatccagaaggag
tccacgctccatttggtgcttcgtctccgtggtggtatgcagatcttcgtgaagaccctg
accggaaagactatcactttggaggtcgagagctcggacaccattgacaatgtgaaggcg
aagatccaggacaaggaggggatcccaccagaccagcagaggttgatctttgcagggaag
cagctggaggacggccgtactttggctgactacaatattcagaaggagtctacccttcac
cttgtgctgcgtctgaggggtggtatgcagatctttgtgaagaccttgactgggaagacc
atcactttggaggtggagagctcggacacaatcgacaatgttaaggccaagatccaggat
aaggaaggtattcccccagaccagcagaggttgatctttgctggtaagcagttggaggat
ggaaggactctggccgactataacatccagaaggagtctacccttcaccttgtcctccgt
ctccgtggtggtttctag
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