Prunus mume (Japanese apricot): 103324538
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Entry
103324538 CDS
T03196
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103324538
Enzymes [BR:
pmum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
103324538
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103324538
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
TYW3
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
TRM5-TYW2_MTfase
Kelch_1
Kelch_HCF
Beta-prop_TYW4
Kelch_2
Kelch_FKB95
TYW2_N_2
Beta-prop_Calicin
NANM
MTS
DUF6242_C
Cons_hypoth95
DNA_methylase
TRM
Methyltransf_25
PrmA
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
103324538
NCBI-ProteinID:
XP_008224831
UniProt:
A0ABM0NHE5
LinkDB
All DBs
Position
LG3:complement(955076..960376)
Genome browser
AA seq
1034 aa
AA seq
DB search
MEFEKRKAATLASLQSEETDKSPKGTVDVPIIPLLNTLNSHPNYFTTSSCSGRISILSQP
PHSKLKTKKKALGGTWLFISHDPADPDSVLNRLFRSESTRKDEQDNQNELVFRFEPLIIA
VECKDLASAQSLVSKAIACGFRESGITNSSKRVIIAIRCSIRLEVPLGSSDDIMVSREYV
RFLVGVANEKMEANRKRTEAFFLALQSDSGGFLGPTPANCGTVADGEAELEARDDNAHSD
SGSVEVPGCSLSVVEMAISGEPEENLFLWGHSACALEAKNQNGVLVFGGFGGIGRHGRRN
HSWLVDPFSGSVKAINVESSPSPRLGHTSSLVGDCVFVIGGRSDPEKILSDVWVLNTSKN
EWKFLECSGDVFPPRHRHAAAFVGSKIYVFGGLNNDKITSSLHVLDTDNLQWKEFFVSGE
HPCARHSHSMVACGSQLYIFGGYNGEQTLGDLYVFNIQTCKWTKEKVAGRSPHARFSHSM
FVYRNYLGVIGGCPVRQHCQELAILDLKQSVWRHAKLESTSEDLFVRSTANIVGDDLVMI
GGGASCYAFGTKFSKPMKINLLPLMSIDNNIKPVVGQRHAHHYEMVNSEKSGRFQDPQAE
DAQSLTEALDLNFESDFPGENGIGQQVESYWILQLERKYAKVGKDILKKFGWLDLGRKVY
SRKGGLHICFPVNGSFSGVFKENKRPLTDLSEGESDHFVKPVIGEECLLNEVTCSKALDI
LKECGATKLADEVLEVRRAAKSPLKVMNEAVGSLIKDKGLPEELLEELPARWERLGDIVV
LPATSFKNPLWDSMREELWRVIAKSVNAHRLARQGRVASNGTRDSTLEILLGDNGWVDHR
ENGILYSFDATKCMFSWGNLSEKLRMASLNCRDEIVVDLFAGIGYFVLPFLVRANAKLVY
ACEWNPHAVEALRRNVQANSVSDRCIILEGDNRTVAPKGVADRVCLGLIPTSEGSWVTAV
RALRSEGGLLHVHGNVKDSEESLWTKHVSESVGEIAKSEGHCWEVSIEHLERVKWYAPHI
RHLVADVRCRQSQR
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgagaaaagaaaagcggcgacgctagcgtcactgcagtcggaggagacagac
aaatcaccgaaaggcacggtggacgtccccatcatacctctcctcaacaccctcaacagc
cacccaaattacttcaccaccagttcctgctccggccgtatctctatcctctcccaaccc
ccacactcaaaactcaagaccaagaagaaagccttgggcggcacgtggctcttcatcagc
cacgacccggccgatcccgactcagtcctcaaccgcctcttccgttccgaatcaactcgc
aaagacgaacaagacaaccaaaacgaactcgtttttagattcgagcctcttatcatagct
gttgagtgcaaggacttggcttcggctcagtctttggtttcaaaggcaatagcttgtggg
ttcagagagtctggcattacgaattcgagcaaacgcgtgattatcgcgatacgttgctca
atacggttggaagtgccgctggggagtagtgacgatattatggtatcgcgcgagtatgtc
aggttccttgttggggtggcaaacgagaaaatggaggccaacaggaagcggactgaagca
tttttcctggctttgcagagtgatagtgggggatttttgggtccgactcctgcgaattgt
gggactgtagcagatggggaggctgagttggaagcaagagatgacaatgcccattctgat
tctgggtccgtggaagttcctggttgtagtctgtctgtggttgagatggcaatttctggt
gaacccgaagagaatcttttcctttggggtcattctgcttgtgcattagaagccaaaaac
cagaatggtgttcttgtgtttggtggctttggaggcataggaaggcatggaagaagaaat
cattcttggctggttgatcctttttctggcagtgttaaagcaattaatgtagagagcagc
ccgtccccacgattgggtcacacatcttctttggtcggagattgtgtgtttgttattgga
ggcaggtctgaccctgagaaaattttgagtgatgtctgggtcctcaatacatcaaagaat
gaatggaagttcttagaatgttctggggacgtatttcctcccaggcatcggcatgctgca
gcatttgtaggctcaaagatatatgtttttggtggacttaacaatgataaaatcacttct
tccttgcatgtcctcgatacagataatctgcagtggaaagaattttttgtcagtggggaa
catccatgcgcccgacattctcactcaatggtggcatgtggatctcaactatatatcttt
ggaggatataatggtgagcaaacacttggagacttgtacgtttttaatatccaaacatgt
aaatggacgaaggaaaaggtggctgggagaagtccgcatgcaaggttctcccactcaatg
tttgtatacaggaattatcttggagttattggtggttgtccagttagacaacattgccaa
gagttggcaatacttgacttgaagcaaagtgtgtggaggcatgcgaaacttgaatctact
agtgaagatttgtttgtgcgcagcacagctaatattgttggtgatgatcttgttatgatt
ggtggtggcgcatcttgttatgcatttggaacaaagtttagtaagcctatgaaaatcaac
ctgcttcccctgatgagtatagataataatattaaaccagttgttggacaaaggcatgct
caccattatgaaatggttaatagtgagaaaagtggacgattccaagatccacaggctgaa
gatgcgcaaagcttaactgaagctcttgatctgaattttgagagtgactttcctggggaa
aatggcataggtcagcaggtagagtcatattggattctacaactcgaaagaaaatatgca
aaagtaggcaaggacatattgaaaaagtttggatggttagatcttggaaggaaggtttac
tccaggaaaggtggtttacatatttgttttccagtaaacggatcattttcaggtgtattt
aaagaaaataagcgtcctttgacagatttatctgaaggagagagtgatcactttgttaaa
ccggttatcggggaagaatgtttgttgaatgaggtcacctgttcaaaagccttggacatt
ctaaaggaatgtggtgctactaagctggcagatgaagtccttgaagtcaggagagctgcc
aaatctcccttgaaagtaatgaatgaagctgtgggctctctgatcaaggataaaggacta
cctgaagaactcttagaggagctaccagcaagatgggagcgacttggagatatagttgtg
cttccggcaacatcattcaagaatccattatgggactcaatgcgggaggagctttggcgt
gttattgccaaatcagttaatgctcatcgccttgcacgccaaggccgagttgcatcaaac
ggtacaagggacagtactttggagattcttctaggagataatggatgggttgatcatcgt
gaaaatggcattctctattcttttgatgctactaagtgtatgttctcctggggcaacctt
tctgagaagcttcgcatggcctctctaaattgcagagatgagattgttgtggatttgttt
gctggaattggttattttgttctgccatttcttgtcagggccaatgcaaaactagtttat
gcttgtgaatggaatccccatgctgttgaggcactgcggcgaaatgtgcaagccaattca
gtgagtgatcggtgtatcattcttgaaggagataaccggacagtagcacctaaaggagtg
gctgatcgggtctgtctcggtctcattccaacaagtgagggtagctgggtcactgctgtt
agggcattaaggagtgagggcgggctgctacatgtgcatggtaatgtcaaggactcggag
gagagtttatggactaaacatgtatcagaatcagtaggtgaaattgctaaatctgaaggt
cattgttgggaagtttcaatagaacatttggagagagtgaaatggtatgccccacatatc
cgtcatcttgttgcagatgtaagatgtagacagagccagagatga
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