Prunus mume (Japanese apricot): 103324559
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Entry
103324559 CDS
T03196
Name
(RefSeq) SWI/SNF complex subunit SWI3B-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103324559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103324559
03036 Chromosome and associated proteins [BR:
pmum03036
]
103324559
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103324559
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103324559
PBAF complex
103324559
GBAF(ncBAF) complex
103324559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Pou
Mt_ATP-synt_D
Motif
Other DBs
NCBI-GeneID:
103324559
NCBI-ProteinID:
XP_016648338
LinkDB
All DBs
Position
LG3:complement(891229..893182)
Genome browser
AA seq
494 aa
AA seq
DB search
MATSSDKPPPAPSPNSVKPETPGSATPRQTQPSPSADANVILVPSYSSWFSPDHIHHCEV
RFLPEFFDSRSPSKNPSLYKYYRNTIVKHSRAVNPSRKLTFTEARKALVGDVGSVRRVFD
FLEAWGLINYTPSALNKPLRWEDKDSKAAAAAAAAGAAESPSGGPKDSASAPNKESPKKR
TCNGCKSLCSIACFVSEKYDMTLCARCYVRGNYQIGVSSSDFRRVEINEEMGNGWADKDT
LHLLEGLMHYGDDWRKVAQHVGRSEKECVAHFLKIPFAEELNGDLDSGNLDHKPSSALQD
NAGDAEFGMEGNGDGTTPSLGKRMRLTPLADASNPIMAQTAFLSALAGVKVAEAAACAAV
TTLCEADYETSRMSAGFRASNARQHETDAALNGDTNTDANLDALGANFVDANSQLEKEGL
DVGRALSGITGVQMKEIQGKIDRFEALDLQMEKEWEQLEQMRNMLFVDQMTLLIHQSSAP
NTAERMQEKNVIID
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctcctccgacaagcccccgccagctccttcaccgaactccgtcaagcccgag
acgccgggatccgccactccgcgtcaaacccaaccgagcccgagcgccgacgctaacgtc
atccttgtccccagctactccagctggttctcgccggaccatatccaccactgcgaggtc
cggttcctcccggagttcttcgactctcgctctccgtccaaaaaccctagcctttacaag
tactaccgcaacaccatcgtcaagcactccagagctgtaaacccttctcggaagctcacc
ttcaccgaggcccgcaaggctctcgttggcgacgtcggctccgttcggagggtttttgat
ttcctcgaggcctggggtttgatcaattacactccttccgcgctcaacaagccccttcgg
tgggaggacaaggacagcaaggccgccgccgccgccgccgccgccggcgccgctgaatcc
ccctccggcggtcccaaggactctgcttccgctcccaacaaggagagccccaagaagagg
acttgcaatggctgcaagtctctttgtagcattgcctgctttgtttctgaaaagtatgat
atgacgctgtgtgcaaggtgctatgttcgtgggaactatcagattggtgtgagttcttca
gatttcaggcgggttgagatcaatgaagagatggggaatggctgggctgataaggatact
ctgcatctcttagaaggcctcatgcattatggtgatgattggaggaaggttgcacagcat
gttggtagaagtgagaaggaatgtgttgctcattttctcaagattcctttcgctgaggaa
ttgaatggagatttggattctgggaatttggatcacaagcctagtagtgcattgcaggac
aatgcaggtgatgctgaattcggaatggagggtaatggtgatggtacaacaccgtctcta
ggtaaacgaatgcgtctcacacctcttgcagatgcaagcaacccaattatggctcagacg
gcctttctgtcagcgttggcgggcgtaaaggttgcagaagctgctgcttgtgccgctgta
actacgctgtgtgaggcggattatgagacaagtagaatgagtgctggatttcgggcttcg
aatgcaagacagcatgaaactgatgctgcattgaatggagataccaacacggacgccaac
ctagatgcactgggggcaaattttgtagatgcaaattcacagcttgagaaggaagggctg
gatgtgggaagagcactttctgggattacaggggtgcagatgaaagagatccaagggaag
attgatcgttttgaggcgttggatttgcagatggagaaagaatgggaacaactggagcaa
atgagaaacatgctctttgttgaccagatgacgcttttaattcatcaaagttctgcacca
aacactgcagaacggatgcaggagaagaatgtaataatagattga
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