KEGG   Prunus mume (Japanese apricot): 103324633
Entry
103324633         CDS       T03196                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 1
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103324633
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmum04131]
    103324633
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmum04147]
    103324633
Membrane trafficking [BR:pmum04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    103324633
Exosome [BR:pmum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103324633
  Exosomal proteins of other body fluids (saliva and urine)
   103324633
  Exosomal proteins of colorectal cancer cells
   103324633
  Exosomal proteins of bladder cancer cells
   103324633
SSDB
Motif
Pfam: VPS28 GDH_C DAHL ARM_KNTC1_3rd DUF7784
Other DBs
NCBI-GeneID: 103324633
NCBI-ProteinID: XP_008224936
UniProt: A0ABM1LMV5
LinkDB
Position
LG3:1580925..1583087
AA seq 209 aa
MEVKLANDKREREMYDSFAELYAIIKTTEKLEKAYIRDVISSSAYETECQKLIAHFKTLA
STLKDTIPSIERFAETYKMDCPAAINRLVTSGVPATVEHRAAAAASMTSSAAAVAECTQN
FITAMDSLKLNMVAVDQVHPLLSDLLTSLGKLTFLPPDFLGKVKLKEWIARLSKMGAADE
LTEQQSRQLHFDLESSYNSFMAALPNYGT
NT seq 630 nt   +upstreamnt  +downstreamnt
atggaggtcaagctggcgaatgacaagcgtgaaagagaaatgtatgatagttttgccgaa
ctttacgccattataaagaccaccgagaagcttgaaaaggcatatattcgtgatgtgatc
tcttcatcggcgtatgagactgaatgccaaaagctcattgcccactttaagactttggct
tccacgcttaaagacaccatcccaagcatcgagcgctttgcagaaacatacaagatggac
tgcccagcagctataaaccgccttgtgacctcaggggtgcctgccacagtggagcatcgg
gctgctgcagctgcctccatgacttcctcagctgctgctgtggcagaatgcacacagaat
ttcatcactgcaatggactcattgaagctgaatatggttgcagttgatcaggtgcacccg
ctgctctcggacctcttaacgtctctgggtaagttgacctttctgccaccagactttttg
gggaaggtgaagttgaaggagtggattgcaagattgtcaaagatgggagcggccgatgag
ttgacagagcagcagtctaggcagcttcattttgatcttgagtcgtcctacaactcattt
atggcagctttgccaaactatggtacttga

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