Prunus mume (Japanese apricot): 103324749
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Entry
103324749 CDS
T03196
Name
(RefSeq) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103324749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103324749
DNA repair and recombination proteins [BR:
pmum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103324749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Ran-binding
CTD11
Motif
Other DBs
NCBI-GeneID:
103324749
NCBI-ProteinID:
XP_008225081
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All DBs
Position
LG3:2125750..2129343
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AA seq
933 aa
AA seq
DB search
MFNSSNPLVHSLTPPLKLSSNLFFISVPKPSNLCTRALKPATANFSLSYSLESPSNQLSL
AHSLQSETLEILEWASVCKQLSALAFTAMGFSAAQEAHIPVGRSQEESQKLLDQTTAAVD
AITMAGSPPSDFSAIENVSDIVSYAVSGKLLSINELCAMRRTLNAAKGLFEKLKGLALSA
DCTDRYLPLLEILDDCDFLVELEKTIGLCIDCKLSIIVDTASEDLEIIRSERKSNMENLD
SLLKEVSTQIFKAGGIDSPLVTKRRARMCVGVRATHKHLLPGCIVLDVSSSGATYFVEPK
EAVELNNMEVRLSNAERAEEIGILSFLTSEIAKSETPIMYLLDKVLEVDLAFARAAYALR
MNGVCPIFSSKDCQDLDSGGASLATTVDIEGLQHPLLLEPSLKNLSDVLESSSRNHLSSD
DVNGLKMITGSLSGRASDFPVPIDIKIGCGTRVVVISGPNTGGKTASMKALGLASLMSKA
GMYLPAKNHPKLPWFDLVLADIGDHQSLEQNLSTFSGHISRICNILEVASKESLVLIDEI
GSGTDPSEGVALSASILLYLKGRVNLAVVTTHYADLNRLKEKDNQFENAAMEFCLETLQP
TYRILWGSTGDSNALSIAKLIGFNQRIIERAQKWVERLMPEKQQERKGLLYRSLIEERGR
LEAQAKLAASLHSDIMDLYREIQDEAEDLDKRKRALMAKETLQVQKEVKTAKSQMESVLN
EFDNQLKTAGADQLNLLIRKSEAAIASVIKAHCPDDDLLVSETSTASYTPQPGEQVHLKR
LGDKLATVVETPGDDGTVLVQYGKIKVRLKKNDIRAVPSIEKNRMTNSAPRLKQQASQSR
TGETESGEVTYGPVIQTSKNTVDLRGMRVEEASDLLDLVISARQSQSVLFVIHGMGTGVV
KERALEILKNHPRVAKYEQESPMNYGCTVAYIK
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactcttcgaatccactcgttcactctcttactcctccattgaaactcagcagc
aacctcttcttcatctccgtccccaaaccttcgaacctctgtaccagagccctcaaacct
gccaccgctaacttctcgctttcctactcgctcgagtcaccgtccaaccaactcagcctc
gcccattccctccagtccgaaaccctagaaatcctagaatgggcctcggtctgcaagcag
ctctcggcgttggcgttcaccgccatgggcttctccgccgcgcaggaggcccacattccc
gtcggccggtcccaggaggagagccagaagcttctcgatcagacgaccgcggcggtggat
gccatcacgatggccggttctccgccgtccgatttctcggccatcgagaacgtctcggac
atcgtgagctacgcggtttcaggcaaattgcttagcatcaacgagctctgcgctatgcgt
aggacactgaacgccgcgaagggattgttcgaaaaattgaagggcttggctttgagtgca
gattgtacagacaggtacttgcccctgcttgaaatacttgacgactgtgatttcctagtg
gagctggagaaaacgataggattgtgcatagattgcaagctttcaataattgttgacaca
gctagtgaagacctggagatcattaggtcagaaaggaagagtaacatggaaaatctggat
tctttgttgaaggaagtgtcaacccagatttttaaagctggtggcattgacagtcctttg
gtgactaagcgcagggctaggatgtgtgtgggtgttagggctactcacaaacatttgctt
ccgggttgcatagttttggatgttagtagttctggcgcaacatactttgtggaacccaaa
gaggctgtggagttgaataacatggaagtgaggctttcaaatgctgagagagctgaggaa
ataggcattttgagcttccttacatcggaaattgcaaaatcagaaacaccgataatgtat
ttgttagataaagttctagaagtggatcttgcttttgctagagctgcttatgctctacgg
atgaatggggtatgcccaatttttagttccaaggattgccaggacttagattctggtggc
gccagtttagcgacaactgtagatatagaaggactacaacatccattgctgcttgagcca
tctcttaaaaatttatctgacgttcttgaatccagttctagaaatcacctttcctccgat
gacgttaatggtttaaaaatgattactggaagtttatctggtcgtgcatctgattttcca
gtgccaatagacatcaaaattggatgtggcaccagagtggttgtaatctcaggacctaat
actggaggaaaaacagcttccatgaaagctttgggcctggcatctctcatgtcgaaggct
ggcatgtacctgcctgctaaaaaccacccaaagcttccgtggtttgatcttgttctagcc
gatattggagatcaccagtctcttgagcaaaatctctcaacgtttagtgggcacatatcg
cggatctgtaatattttggaagtggcctcaaaagaatcacttgtcctcattgatgaaatt
ggcagtggaaccgatccttcagaaggtgttgctctttctgccagcatcttgctatatctc
aaaggccgtgttaacttagctgttgtgactactcattatgcggatttaaatcgcctgaaa
gaaaaggataatcagtttgaaaatgccgccatggaattttgtctagaaaccttacaacct
acttatcggatcctatggggaagtactggtgattcaaatgcattgagtattgctaaattg
attggttttaatcaacgcataattgagcgtgcacaaaaatgggtggagaggttaatgccc
gaaaagcaacaggagcgaaaaggtttgctatatcggtcattaatagaggaaagaggcaga
ctagaagctcaggcaaaactggctgcatcacttcattcagatatcatggatctttatcgt
gagatccaagatgaggcagaagatcttgataagcgcaagagagctcttatggcaaaggaa
accctacaggttcagaaagaagtgaagactgcaaaatctcaaatggaatctgtgctgaac
gagtttgataaccaactcaaaactgctggtgctgatcagttgaatttgctgattaggaaa
tcagaagctgcaattgcatctgttattaaggctcattgtcctgatgatgatttgttggtt
agtgagacatctactgcttcatacacgccccaacctggggagcaagtccatttgaagaga
ctgggagataagttagctactgttgttgaaacacctggagatgatgggacagtccttgta
caatacggtaaaataaaggttcgcttgaagaagaatgacatcagagctgttcctagcatt
gagaagaatcgaatgacaaattctgccccacgtttgaagcagcaggcttcgcagagtcgt
actggggaaaccgaaagcggggaggtcacctatggtccagtgatacaaacgtcaaagaac
accgtggatctccgtggcatgagggtggaggaagcttctgacctcctggacttggtcatc
tctgctagacaatctcaatcagttctctttgtcatacatgggatgggcacaggggttgtt
aaagagcgagcacttgagattttgaaaaaccatccacgagtagccaagtatgaacaagaa
agtccaatgaattatggttgtacagttgcttacatcaagtaa
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