Prunus mume (Japanese apricot): 103324922
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Entry
103324922 CDS
T03196
Name
(RefSeq) carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmum01009
]
103324922
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103324922
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
103324922
Protein phosphatases and associated proteins [BR:
pmum01009
]
HAD phosphatases
Fcp/Scp phosphatases
103324922
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
103324922
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NIF
HAD
Motif
Other DBs
NCBI-GeneID:
103324922
NCBI-ProteinID:
XP_008225256
UniProt:
A0ABM0NIE3
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All DBs
Position
LG3:complement(3002935..3003942)
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AA seq
335 aa
AA seq
DB search
MVSRILKKTPSTNKHMPIKRCRGIRRRHRRNCSLKKSAIAPSTVLLTRVGTNKAFKVLHK
PQSPETRTEPQARLPLPPLASPEKRTVCLDLDETLVHSVTGPPPKNFDFVVRPKIRGKVM
TFYVVKRPGVDAFLERLAAQYEVVVFTAGLRDYATLILDRLDRKRLVSHRLYRDSCKEMS
GKFVKDLSGLGRDLRRVVIVDDNPNAYFLQPENAIPVVRFYDDPADRELTRLLEFFEDEE
LRCCEDIRVAVKKFVGDDGLMSSDDDDDDDELQEMSDAKSKPTVSTPFSIISVHRVRPFG
PPVLEWGTKVVIVCSFFLLIINVIVCFRTGFHPFF
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccaggattctcaagaaaacccccagcaccaacaagcacatgcccatcaagcgc
tgccgcggcatacggaggcgccaccgccgcaactgctccttgaaaaagtcggcgattgct
ccatccaccgtcttgctgacccgcgtcggcaccaacaaagcattcaaggtcctccacaaa
ccccagtccccggagacccggaccgaaccccaggcccgcctcccactcccgcctctagcc
tcgccggagaaacggacagtgtgtctggacctcgacgagaccttggtccactccgtgact
ggtccgccgcccaagaacttcgacttcgttgtccggccgaagatccgcggcaaggtgatg
actttctacgtggtgaaacgacccggcgtggacgcttttttggagaggctggcggcacag
tacgaggtggtggtgttcacggcggggctgagagactacgcgacgctgatactggaccgg
ctggaccggaagcgcctggtgtcgcaccggctctacagggactcgtgtaaggagatgagt
gggaagttcgtgaaggacttgtccgggttggggcgggacttgaggcgggtggtgattgtg
gacgacaatcccaatgcttatttcctccagccagagaacgcgatccccgtcgtccggttt
tatgacgacccagcggaccgggagctcacgaggttgctggagttctttgaggacgaagag
ttacgttgttgtgaggacattagggttgccgtgaagaagtttgttggtgacgatggattg
atgtcgtctgatgacgacgacgacgacgatgagttgcaggagatgagtgatgctaagtct
aaacctaccgtttcgacgccgttctctatcatcagtgtccatagagttcgcccatttggg
ccgccagttttggagtgggggacaaaggtggtgatcgtgtgcagtttctttctgctaatt
attaatgtaatcgtgtgctttcgcacaggatttcatccttttttttaa
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