Prunus mume (Japanese apricot): 103324940
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Entry
103324940 CDS
T03196
Name
(RefSeq) uncharacterized protein LOC103324940
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103324940
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
103324940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
TFIIB
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
103324940
NCBI-ProteinID:
XP_008225278
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All DBs
Position
LG3:3266777..3268859
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AA seq
542 aa
AA seq
DB search
MPICISCKGKTFIRDDITNNLACSTCGRLQEYDNLVDQYGGINGPTGTFVSVGTTGTGNV
YSYKETKIYEARKLIDDVSLRLGFSPSESDDVKRMVATITEGEYGQGNWFNVFVGACSYV
GMRRDNKSLPISEVASVIGSDAYELGRMIMRVVNFLDLKKPNFPEFDIVNLFERTLRNSH
SFADVEGDKVQRMKKQGIFLIHCAMKWFLTTGRRPLPIVAAVLVLVAELNGISVRIEELA
KEIHAVVHTSRLRYRELLQALVKVAQALPWGKDITVKNVVKNAPFVIQYMERKAMSTPSK
KKDSEGGVGLDLGDVVRDCLRKDIGDGTDMMSFEDDSETEMEKLKLAHQSRYFEAEDGGC
ALSVDNVDKLKLSHECLSMMYSKFLDEVGNVKSSGGLKEVRERKKRRGFELHACTEWWNG
KSALSRRLLLKEILEKDVGLDVVPPSFVNGCVTVKKRREKINAAKLRIDKIMHPLNAHSG
DSIDTRTTEDVHSTKKRKRARGIDWEDLIIETLLLHRVKEEEIEKGWYNVLLELHVFNSG
IV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcccatctgcatcagttgcaagggcaagaccttcatccgcgacgacatcaccaacaac
ctcgcctgctccacctgcggacggctccaagagtacgacaatttggtcgaccagtacggc
ggcatcaacggccccaccggcaccttcgtctccgtcggcaccaccggcaccggcaacgtt
tacagctacaaagagaccaaaatctacgaggcaagaaagctcatcgacgacgtgtcgctt
aggctgggattttcgccctccgaatccgacgacgtcaagagaatggttgcgacaatcacc
gaaggtgagtacggccaaggtaattggttcaatgttttcgttggtgcttgctcctatgtt
ggcatgagaagagataacaagtccttgccgatctccgaggttgcttcggtgatcggctcc
gatgcctatgaacttggtaggatgatcatgcgggttgttaatttcctcgatttgaaaaaa
cccaattttccagaattcgatattgtcaacttgttcgagcggacgcttaggaattcgcat
agtttcgctgatgttgaaggggataaggtgcagagaatgaaaaaacagggcatatttttg
atacattgtgccatgaagtggttcttgaccaccgggcgtaggccgcttccaattgtggcg
gcggtgttggtgctcgtggcggagttgaatggtattagcgttaggattgaggaattggct
aaggaaatccatgctgttgtacacactagtaggttgaggtatagggagcttttacaggcg
cttgtgaaggttgcacaagccttgccttgggggaaggatattacagttaagaatgtggtt
aagaatgccccgtttgtgattcagtatatggagaggaaggcaatgtcaacgccgagtaag
aagaaggattcggagggcggtgttgggttggatttgggagatgttgttagagattgtttg
aggaaagatattggagatgggactgatatgatgtcctttgaagatgattctgaaacagaa
atggaaaagttaaagcttgcacaccagtctcggtattttgaggcagaagatggtgggtgc
gcattgagtgttgacaatgtggataagctgaaactttcacacgaatgcttatccatgatg
tactcaaagtttttggatgaggttgggaatgttaagtcgtctggggggttaaaagaggtt
cgtgaaaggaaaaagaggcggggttttgagctccatgcttgtacagagtggtggaatgga
aagtctgcattgagcaggaggcttctacttaaggagatattggagaaagatgtaggattg
gatgttgtgcccccatcttttgttaatggttgcgtgactgtaaagaagaggagagaaaag
ataaatgctgccaagctgcgtattgataaaattatgcatccattaaatgctcattctggt
gacagtatcgatactcgcactactgaagatgtacatagtacgaagaagagaaagagagca
cgtggtattgattgggaagatttaattattgaaactcttctccttcatcgagtaaaagag
gaggaaattgagaaggggtggtacaatgtcttactggaattacatgtgttcaactctggg
attgtgtga
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