Prunus mume (Japanese apricot): 103325027
Help
Entry
103325027 CDS
T03196
Name
(RefSeq) uncharacterized protein LOC103325027
KO
K13217
pre-mRNA-processing factor 39
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103325027
Spliceosome [BR:
pmum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103325027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
103325027
NCBI-ProteinID:
XP_008225370
LinkDB
All DBs
Position
LG3:3784087..3792199
Genome browser
AA seq
1143 aa
AA seq
DB search
MRTCNCESEPEPMESDSPDDFRRDSLDFDHWTSLISEIETAYSDDVEKISSVYDSFLSEF
PLCHGYWRRYADHKARLCSVDKVVQVFERAVQSATYSVPLWLEYCNFAVAAFEDPSDIRR
LFQRGMSFVGKDYSCHTLWDKYIEFEYSQQQWSLLAQIYIQALRFPTKKLHRYYESLKKF
GASCEEEMKCQSSSTVDLQSETVLDSEAPTTYRDDEIALVAKDLLDPAIGLERSKALQKY
IYVGKQLYQEACRLDETIRTFEINIRTSYFHVKPIDVGQLENWHHYLDFVEIQGDFDWAV
KLYERCLIPCANYPEFWMRYVEFMEINGGREIANYALDRATQIFMKRLSVIHLFNARFKE
KIGDVSGARAAFPKCDTESDSQFVKNVMLKANMEKRMGNFAVASNIYKEALEMAAEKKKL
HTLPILYAHFSRLTYMMTDSADAARDVLIDGIKHLPHCKSLLEELINFSIMHGGKRHLNV
VDSIVATAISPQSSVSDVLNAKDAEDISSLYLEFVDLCGTIHEVRKVWNRHVRLFPSSTR
TASFDQHATFTKLLKLARGTKETLVALPQQPSGDCNSDSLIELSLHDSKMLLPDNHKIES
GQDPTDQICYQKLSSPGSQLEKTTSDKLQPRQPENIQETLKLPSVEVSKEQSRDDTPEAN
LSSVDLVKVKQVSPEVSEEPRENTSEPKALSVELGCQVAEGNDSVEPSQEGTNRSDANRE
CDNKSEQDLKPLSLESLSLNSQENTNLDLIPSIYLNREGSQETSTSNGRKLESNCKSNED
SYMYSPRKARALETAGNKVVNPISTHALSQPAVNSYGDWHQNNRSGKVRRDSKFGFRGRL
QRKSYQQQPVSPQKYPQTEVGGPMPGTDSLCQPSQFVSSQSPQIQQGSQDHNPYQAAATP
ANVMASKAWHMQNVPQPNYASSCQPQLPVQSVVPQASQGSILGQYGMQNSQAYNQMWQYY
YYQQQQQQFLLQQQLHQTQQQQQQPQPQQQQQQVLLQQYQQQPQQLQQYYGQIQQQQPYQ
QQQLQTQHNMQQQIPLQQQQYNQQLQMQQQQLQQPHQQQQLQEQQHLSYVQNNQQPLQQQ
SLMQEQQQQQISPGIQHDNYYHQDQAAVPPNNSDSHGTVVSFISPHTQTEMNADALAGNT
SML
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttgtaattgcgaatcggagcctgagcccatggaatcagactctcctgatgat
tttcgtcgagactcactagactttgatcactggacttcactcatttcagagatagagact
gcatattctgatgacgtagagaaaatatcttcagtttatgactcgttcttgtccgagttt
ccgctgtgccatggatactggaggaggtacgctgatcataaggcccgcttatgcagcgtt
gacaaggttgttcaagttttcgaacgagcggtgcaatcagcaacgtactctgttcccctg
tggttggagtactgtaacttcgctgtggcagcttttgaagacccatctgacattcgcaga
ttatttcagagaggcatgtcttttgttggaaaggattactcatgccatactttgtgggac
aaatacattgaatttgagtattctcagcagcaatggagtttgctggcgcagatttacatc
caagcacttagatttcctaccaaaaagttgcatcgttattacgaaagtttgaagaagttc
ggtgcctcatgtgaagaggagatgaaatgccagagtagttctactgtagatttgcaatca
gaaactgtgcttgatagtgaagcccctacaacttatagagatgatgaaattgctcttgtt
gccaaagacttgcttgatccagcaattggcttagaaaggtctaaagcactgcaaaaatac
atatatgtcggaaagcagttgtatcaggaagcatgtcggctggatgaaacaattcgtact
tttgagattaatataaggacgtcttacttccatgtcaagccaattgatgtgggtcagttg
gagaattggcatcactatctggactttgttgagatccaaggggattttgactgggctgtt
aaactttatgagagatgcttgattccctgtgccaattaccctgagttttggatgcgttat
gtggaattcatggaaatcaacggaggaagagagattgcaaactatgctcttgaccgagca
acccaaatatttatgaagagactgtcggtgattcatcttttcaatgccaggtttaaggag
aaaataggagatgtatctggtgcccgagctgcttttcctaaatgtgatacagaatcagat
tcccagtttgtgaagaatgttatgttaaaggctaatatggaaaaacgtatgggaaatttc
gcagtagcttccaatatatacaaagaagcactagaaatggcggcagagaagaaaaagttg
catactcttcctattttatatgctcatttttcccgacttacctacatgatgactgatagt
gcagatgctgccagagatgtcttgatagatggcatcaaacacttgcctcattgcaaatca
cttctagaggagttgataaacttttcaattatgcatggagggaagcgacacctaaacgtg
gtagattctattgtagccactgcaatatctccacagtcaagtgtatctgatgttctgaat
gcaaaagatgcagaggatatttcaagcttatatttagagtttgttgacctatgtggaact
atacatgaagtaagaaaggtgtggaatcggcatgtacgattgttcccatcctctactagg
acagcttcttttgatcagcatgctacatttacaaaacttttgaaattggctagaggaaca
aaggaaacattggttgctctgcctcagcagccatctggagattgtaattctgactccctg
attgagctctcattgcatgacagtaaaatgttattgccagacaatcataaaatcgagtct
ggccaggatcctactgaccagatatgttaccagaaattgtcatctccgggaagtcaactt
gagaagactacttctgacaagcttcaaccaaggcaacctgaaaacatacaggaaacgctg
aaactgccatctgtagaagtttcaaaagagcaatccagagatgatacaccagaagcaaat
ctgtcatctgtagatttagtaaaagtgaagcaggtatctcctgaagtttctgaggagccc
agagaaaatacttctgaaccaaaggcattatctgttgaattaggatgtcaagttgctgaa
ggaaatgattctgtagaaccttcacaagaaggcacaaacaggagtgatgctaatcgagag
tgtgacaacaagtctgaacaagacctgaagccactgtcattagagagtctttctctaaat
tcccaggagaatacaaatctggatttaataccctccatttatctcaaccgcgaaggttct
caagaaaccagtacttcaaatggaaggaagctagagagcaattgcaaatctaatgaagac
tcttatatgtacagcccaagaaaggccagagctttggagacggctggaaataaagtggtt
aatccgatttcaacacatgccctttctcaaccagctgtgaatagttacggagactggcat
caaaataatcgttctggtaaagttcgtagagattccaaatttgggtttcggggacgttta
caaagaaaatcatatcagcagcagccagtttccccgcaaaaatacccacaaactgaagtg
ggtggtccaatgcctgggactgacagtctatgtcaaccctctcaatttgtgtcttcacag
agcccacaaattcagcaaggcagccaggatcataatccgtatcaagcagcagctactcct
gctaatgtaatggcatccaaggcttggcatatgcaaaatgtaccacaaccaaattatgcc
tcttcatgtcagccccagttgcctgtccaatctgttgttccacaggcatctcaaggatca
attttagggcaatacgggatgcagaatagccaagcatataatcagatgtggcaatattat
tactaccagcagcagcagcagcagttccttcttcaacaacagctgcatcaaacacagcag
caacaacaacagccccagccccagcagcagcagcagcaggtcttgttgcaacagtatcag
cagcagccgcaacaacttcaacaatattatggtcagatacaacagcaacaaccttatcaa
cagcagcaattacagacacaacacaatatgcagcaacagattcctttgcaacaacagcaa
tacaatcagcagttgcaaatgcaacaacagcaacttcagcaaccacatcagcagcagcaa
cttcaggaacaacagcatctgagttacgtgcagaacaatcagcagccactccaacagcaa
tcacttatgcaggagcagcagcagcagcaaattagtcctgggattcagcatgacaactac
taccatcaggatcaagcagctgtgccaccaaataattctgatagccatggaacagttgta
tctttcatatctcctcatacgcagacagaaatgaatgcagatgccctggcaggcaacacg
agcatgctgtga
DBGET
integrated database retrieval system
