KEGG   Prunus mume (Japanese apricot): 103325167
Entry
103325167         CDS       T03196                                 
Name
(RefSeq) splicing factor 1 isoform X1
  KO
K13095  splicing factor 1
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103325167
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmum03041]
    103325167
Spliceosome [BR:pmum03041]
 Complex A
  Other components
   Complex A specific factors
    103325167
SSDB
Motif
Pfam: KH-I_KHDC4-BBP SF1-HH KH_1
Other DBs
NCBI-GeneID: 103325167
NCBI-ProteinID: XP_008225568
UniProt: A0ABM0NJ58
LinkDB
Position
LG1:734922..740549
AA seq 815 aa
MTAKVDAASSVEPHSVEMSGATISSAPSIGTQKVSMFAAKSGFVIPKNKLSGSLVPIFRG
SKNLGASDAVSGESKKQIQRKTKWGPDLAQDASVRKGRALAYQTRVDQITQQLKSGMSEA
ENDEDLPSAPQDPDHNSFRHQIDREDVEQLELEKREVIGEILKLNPSYKAPPDYKPLLKE
ATVPIPVKEYPRYNFVGLIYGPGSDNQKQLEKETGAKIQVYGTKAGTGEKVEIKPSDGSE
VQSGYEKLYVHISADTFEKVDAAVAVLELLVTSVSGNLASVSGDNPHAPPSQGPDATTPN
MVPTMLNQGIVQPVAGPTQTPPNGQFQYPGPFFSTGPSSTPMNIPGYLPLDSSRPIFNNP
SYQSTSPFNSTHLPSLFGPPPALVSPRQNPPTQVLQHLYMAQTRPGYVGSPRNLSLMSPQ
PSSVQTNISAPLTFMGNQPPPTGQPSNISPFAPSFPQHVSNHPHGPSGNSTGWSSGVPAP
QPGVASMPPPSNISTANMVSSVTFPPGPSTLLSSAPVNHAAPSFTSIPRPQVGIPSTLAA
SMLPMPAVAQPKPFMSPLSGPVPAHSTGPVTSLAPSMQPRVPISVTGSVPNFTPQKPPMM
TAPSPGDFTFQPHRPQNPSFQPVPQPNSHFAAHSASPARPMIPHPSPQAPSFQLPVQNMT
PQLGSEVLSRPQVGDHMGQPPPAHISAVPFARNSTAISVPPRHAAYLDTSPVAPRTPHLP
MRPRNFNPAHQMPNFPIPLPPRPGNHIQIQQNYPAHLTRPEMPQAPNQQFSNNLAFASGK
PAPRPGGQQLYDPFSPTSMSTATQQQGGNPAKMGK
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgactgcaaaggttgacgctgcatcttcagttgaacctcacagtgttgagatgtctggg
gcaactatttcatctgcaccatcaattggtactcaaaaggtctctatgtttgctgctaag
tctggatttgttataccgaaaaacaagctgtcgggctcacttgtacccatcttccgtgga
agtaaaaacctaggagccagtgatgcagttagtggagaaagtaagaaacagattcagagg
aaaacaaaatggggccctgatctggcccaagatgcttccgtgagaaagggaagagcctta
gcttatcagactcgggtggatcaaattacacaacagctgaaatctggaatgtcagaggct
gagaatgatgaggacttaccatcagcacctcaagatccagaccacaactcctttaggcat
caaattgacagagaggacgtagaacagttggaacttgaaaagcgagaagtcataggtgaa
atattaaagttgaatccaagttacaaggccccacctgattataaacctttgttgaaagag
gccacagttcctattcctgtgaaagaatatcctagatacaattttgttggcctaatatat
ggtcctggaagtgataatcagaagcaattagaaaaggaaactggagccaagattcaagtc
tatggtaccaaagcagggacaggagagaaggttgaaataaaaccatccgatgggagtgaa
gtccagagtggatatgaaaagttgtatgttcatatatcagcggacacatttgagaaagta
gatgcagcagttgctgtacttgaactgctagtgacttctgtatccggaaatctggcatca
gtttctggtgataatcctcatgctcctcctagtcaaggcccggacgctaccacccccaac
atggttcctactatgttaaaccagggaattgtgcaaccagtggcaggacctacacagact
ccaccaaatgggcagtttcagtaccctggtccatttttctctactggcccctcttccact
ccaatgaatatacctggttaccttccactagattcttcaagaccaattttcaacaatcct
tcctatcaatcaacatcacccttcaactctacacacttgccctcattatttgggcctcca
ccagctcttgtttcccctagacaaaacccaccaacacaagttttgcagcatttgtatatg
gctcagacccgccctggttatgttggctcgccaagaaatctttctttgatgtctccccag
ccttcgtcagttcaaactaatatttcagctccactcacattcatgggaaaccaaccccca
ccaacaggccaaccctctaatatcagtccatttgcgccttcatttcctcaacatgtgtct
aatcatccacatggaccttctgggaactctactggatggtcaagcggagtacctgcacca
caaccaggtgttgcgtctatgccaccaccttcaaatatatcaacggccaatatggtttct
tctgttaccttcccacctgggccttccacactgttatcaagtgctcctgtaaaccatgca
gcaccaagttttacttctattccacggcctcaagtgggaattccttctacattagcagct
tctatgcttccaatgcctgcagttgcacaacctaaaccatttatgagccctttatcaggc
cctgttccagctcattcaacaggaccagttacatctctagccccatctatgcaaccaaga
gtgccaatttctgttactggaagtgtaccgaatttcaccccccaaaaaccaccaatgatg
acagctccaagccctggcgatttcacttttcagcctcaccggccacagaatccatccttc
caaccagttccccagccaaacagtcactttgcagcgcacagtgcttctcctgctagacca
atgattcctcatccatcacctcaggcaccgtctttccagttgcctgtgcaaaatatgact
cctcagctgggaagtgaggtgttatcgaggccacaggttggcgaccacatgggtcaacct
ccaccagctcatatatctgctgttccctttgccagaaattctactgccatctcagttcct
cccagacatgcagcatatctagacacgagtcctgttgcacctaggacgccacacctgcca
atgagaccaaggaacttcaatccagcccaccaaatgcccaattttcccattcctctgccc
ccaaggccgggaaatcatattcaaattcagcaaaattatcctgctcacttgactcgtcct
gagatgccacaggctccaaatcaacagttcagcaacaatcttgcatttgcctctggtaag
ccagcgcctaggcctggaggacagcagctttatgatccgttctcgcccacatccatgtct
actgcaactcaacagcagggaggtaatccagcaaagatgggaaagtag

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