Prunus mume (Japanese apricot): 103325174
Help
Entry
103325174 CDS
T03196
Name
(RefSeq) uncharacterized protein LOC103325174
KO
K14315
nucleoporin NDC1
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103325174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103325174
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103325174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
103325174
NCBI-ProteinID:
XP_008225539
LinkDB
All DBs
Position
LG3:4637980..4642698
Genome browser
AA seq
543 aa
AA seq
DB search
MASSSPPGMVVHNRFLGFLIWQSIPSTVIFFIFKTLSSTISSTSHSTAKPPFPFAPYVFS
FITFLTFHLSQLLFSFSLSLISSPHPRGLVSPLQLALGLIRFLFVPGGSDLSESPESRVR
AKLSVGFLLFLAAVAVSGFVAVVSVCVKFGDGVGMIGAVGFRGFVMGLLYGLYYVYYRRW
VFEFPIIQRPPFFSFKMGLPSAITRSLKLSCLASLFSAFLVVFLPHQLQNQATIGKVIAE
QIIFYIGSFLVFLCWEISHHLHQVLHTKRFVFAPPKGSAAAETNPSEHLLSALEESSPNS
LLQYLAYLDLYMVCENNVDTWRRAAFFEESGETYKRVIYVCLRPLEQLASKLGEGLESSV
EKSSQISNQLLSPTDQRLDPKYSEPLNNFQLYAWCAWTAASLTTCSHREDRFGVAQLSGS
NAAVISTLISCLLAVESYMGKKTNFQSAQHFMGSTGFKLRTSSAGNIGMGKKRAGPLHSK
AYAIADVLRNSIYHIVSTFHDQMASSGKKGLLEKDWIISDKPPFGTRELLVQKLHLFLDF
RAS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcttcgccaccaggcatggtggtccacaaccgcttcttagggttcctcata
tggcaatctatcccctccactgtcatcttcttcatcttcaaaaccctctcatcaaccatc
tcttccacttctcactccaccgccaaacccccattcccctttgccccgtatgttttttcc
tttattacattcttgaccttccacctttcacagcttctcttctccttctcactctccctc
atctcctcaccccacccccgcggcctagtctctcctcttcagctcgctctcggcctcata
cgcttccttttcgttcccggtggctccgatttatcagagtctcccgagtctcgggttcgg
gctaagttatcggtcgggttcctgctgtttttggcagcggtggcggtttcggggttcgtt
gcggtggtttcggtgtgtgtgaaatttggtgatggggttgggatgattggggcagtgggg
tttaggggttttgtgatgggtttgctttatggcttgtattatgtctattaccgcagatgg
gtcttcgagtttcccattattcagcgtcctccttttttcagcttcaagatgggactccct
tcagctatcacacgatccttgaagctatcctgcctggcatccctattttcagcttttctg
gtggtgtttctgccccaccagcttcagaaccaagctacaatcggaaaggtcattgctgag
cagattatattttacattgggagtttcttagtgtttctctgctgggaaataagtcaccat
ttacatcaggttcttcatacaaagaggtttgtatttgcaccacctaaaggatcagcagca
gcagaaacaaatccaagtgagcatctcctttcagctctggaagaaagcagtcctaattct
cttctccagtatcttgcatatcttgatctctatatggtttgtgagaataatgttgatact
tggcgacgagctgcattttttgaagaaagtggtgaaacttacaaaagagttatatatgta
tgcttgcggcctctggagcagcttgcatcaaagttgggcgaaggcttggaaagttctgtt
gaaaaaagctcccaaatatcgaatcagttactgtctccaactgaccagcgactagaccca
aaatactctgagccattgaacaacttccagctatatgcgtggtgtgcctggacagctgcc
tcactgactacatgctcacacagagaggacagatttggggttgcccagctttctggcagt
aatgctgctgtgatatcaacactgatttcttgtcttcttgctgttgaatcatacatgggg
aagaagaccaatttccaatctgcacagcattttatggggtcgactggttttaaattgaga
acctctagtgcggggaatattggcatgggtaaaaagagagctggcccccttcattcaaaa
gcatatgcgattgctgatgttcttaggaactcaatctaccatattgtgtctactttccat
gatcagatggcaagcagtggtaagaagggtcttcttgagaaggattggatcatcagtgac
aagcctccttttggaacacgcgagcttctagtgcagaaattgcatcttttcctggacttt
cgagctagctaa
DBGET
integrated database retrieval system
