Prunus mume (Japanese apricot): 103325221
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Entry
103325221 CDS
T03196
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmum03009
]
103325221
Ribosome biogenesis [BR:
pmum03009
]
Eukaryotic type
90S particles
Other 90S particles
103325221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_EML
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_SCAP
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IFT122_1st
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
103325221
NCBI-ProteinID:
XP_008225587
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All DBs
Position
LG3:4882033..4886205
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AA seq
523 aa
AA seq
DB search
MKNKKKGGSAPKGPKAAKKSKTYSLNEDSFFSTESKKRRKIDRDEIESDSDDDYGVVGSD
GEGGGEEAEEAEAIEETADEKRKRIAQEYLEKVRGLARREKEEEEDESDEEGEKEGERDS
LVAKILQQQQLEDSGRVRRAIASRVQKPESTDEFRISVKHRQSVTAVALSEDDFKGFSAS
KDGTILHWDVDSGKSERYLWPRDEVLKSHGVKDPQGRATKHSKHVLALAVSSDGRYLASG
GLDRHIHLWDTRTQEHIQAFPGHRGPVSCLTFRQGASELFSGSYDRTVKIWNVEDRAYID
TLFGHQGEVLSIDCLRKERVLSVGHDRSMQLFKVPEASRLVFRAPASSLECCCFISNDDF
LSGSDDGSVELWSMLRKKPVCIVKNAHPFLAARKNVEQKDGDRIPNGHIENGDHTSQSYD
CSSTYSWISSVTVCRGSDLAASGAGNGSVRLWAIESESKAMKPLHDLPLVGFVNSLAFAK
SGGFLVAGVGKEPRLGRWGHISSARNGIAIHPLKLSSDDTDNF
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaagaaaaaaggaggctcagctcccaagggacctaaggcagccaaaaagagc
aagacttactctctcaatgaagactcgttttttagcactgaatcgaagaaacgccgaaaa
atcgaccgtgatgagatagagagcgattcagacgacgactatggcgtcgttggatcggat
ggggagggcggtggagaggaagctgaggaggctgaggctatagaagaaactgcagatgag
aagaggaagaggatagcgcaagagtacttggagaaggttcgaggattagcaaggagggag
aaggaagaggaggaggatgagagtgatgaagaaggtgagaaggaaggcgagagagactcg
cttgttgccaagattttgcagcagcagcagctcgaggacagtggccgagttcgccgtgcc
attgcttctagggttcaaaagcctgaatctactgatgaatttcggatctcagtgaagcat
cgacaatctgttactgctgtggctctgtccgaggatgacttcaagggcttctcagcttct
aaggatggcaccattcttcattgggatgtagatagtgggaaaagtgaaaggtatctatgg
ccccgtgatgaagtattaaagtctcatggggttaaggatccgcaaggtcgagccacaaag
catagtaaacatgtgttagctctagcagttagctctgatggtcggtatttggcaagtgga
ggcttagatcgccatattcatttgtgggatactcgtacacaagagcatattcaggctttt
ccaggtcatagaggccccgtttcatgtttaactttcaggcaaggggcatcagaacttttt
tctggttcatatgatcgaacagttaagatatggaacgttgaagatagagcttacatagat
acattatttggtcaccaaggagaagtattaagtattgattgcctacgaaaagaacgggtt
ttgtctgttggacacgatcgaagcatgcagttatttaaggttccagaggcatcacgttta
gtattccgtgcccctgcatcttctttggaatgttgttgttttattagcaatgatgacttc
ttatccggctctgatgatggaagtgttgagctttggagcatgctgcgaaagaagcctgtt
tgcatagttaagaatgctcatccttttttggctgcacgcaaaaatgttgaacagaaggat
ggtgatagaattccgaatggtcacatagaaaatggtgaccacacttctcaaagttatgat
tgttcatcaacatattcttggatcagttcagtcactgtttgcagaggcagtgaccttgct
gcatcaggagctggtaatggctctgttcgtttatgggctattgaaagtgagagcaaagcc
atgaagcccttacacgacctcccattggttggatttgtgaattctttagcttttgcaaaa
tctggaggatttctagttgcgggagttgggaaggaacctcgactaggaaggtggggacac
atctcatctgctcggaatggaattgcaatccatccccttaagctttcatcagatgataca
gataatttttag
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