KEGG   Prunus mume (Japanese apricot): 103325318
Entry
103325318         CDS       T03196                                 
Name
(RefSeq) lysine-specific demethylase JMJ18
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pmum01009]
    103325318
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmum03036]
    103325318
Enzymes [BR:pmum01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     103325318
Protein phosphatases and associated proteins [BR:pmum01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103325318
Chromosome and associated proteins [BR:pmum03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103325318
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 103325318
NCBI-ProteinID: XP_008225698
LinkDB
Position
LG3:5692973..5700446
AA seq 1059 aa
MEQFKLAAESQQKEDHSFKSNQRSDDAHECSGSPRSRKISARWDPDEPCRPAIDEAPVFY
PTIEEFEDTLGYIAKIRLVAESYGICRIVPPPSWTPPCPLKDKEMWEHAKFSTRIQQVDL
LQNREAMKKKSRGRKRKRRRHSRMGTKRRSEANVASETDEKFGFHSGSDFTFEEFQRYAY
TFKESYFRSKDAKEGSNSGETRSKIWKPSVEDIEGEYWRIVEQPTDEVEVYYGADLETGV
FGSGFPKALSMVTKSDSDQYAMSGWNLNNFPRLPGSVLSFEASDISGVLVPWLYVGMCFS
SFCWHVEDHHLYSLNYLHWGDPKVWYGVSGSRAQSLECAMRKHLPDLFEEQPDLLNELVT
QLSPSVLKSEGVPVYRAVQHSGEFILTFPRAYHSGFNCGFNCAEAVNVAPVDWLEHGQNA
VELYSEQCRKTSISHDKLLLGSAQEAVQALWELSVLGKKTTRNLSWQNVCGKGGVLTRAV
KTRVQMEEERLDRLPICLKLQKMERDFDLNERECFSCFYDLHLSAASCKCSPDRFSCLKH
AKHFCSCDISHKYVLQRHTISELNMLVEALEGRVEAMKVWASKDPVVVSIDGTGWRTTKL
DQESSMSHKRVKSCNPRETSSCCPVSEEKVNINASCSSSSQVSSAVVQSGSQHGAFSLSA
SRITMDRQNDDETLAMNDEEKMGNECCFDLNLNYMSDERESRTMHISDDFDNKAVTIEED
ASTSVSNQEKVCSSDVARDPDMMKVDNGYPACSRDIRNSCASDGNKLFGVELCLPHPSSN
KQSINFTKTETVEDSGVNISLTDQSCQLQKLSPSVEPIDFGAVVSGKLWCSKQAMYPKGY
RSRVKFYSVLDPTKVCSYISEVLAAGLIGPLFKVTLEECPGEAFANVSAEKCWDMVLQRL
NQEIKRRSSLGESGLPPLQPSINGLEMFGFLSQPIIEAIEALDPDHQCVEYWNYRHIVPL
AFGNVSEIKQHSFESSRSLGETDTKIFGITLTRLDRDNPLVEGDHPTEEMQLVLRRLLKK
ADSEELRTLQRVLCSESQSSKWRVAFTSLIEEIQRNVDS
NT seq 3180 nt   +upstreamnt  +downstreamnt
atggaacagttcaaattagcagcagaatctcagcaaaaagaggatcattcttttaagagc
aaccagagaagtgatgacgcacatgagtgctcaggcagtcctcgaagtcgaaagatatca
gctagatgggatccggatgaaccatgcaggcctgccattgatgaagcacctgtattttat
ccaactattgaggagtttgaagatacacttggttacatagcaaagatacgcctagtggct
gaatcttatggtatatgtcggattgtcccgccaccttcctggacccctccctgccctctt
aaggataaagagatgtgggagcatgctaaattttccacacgtattcagcaagttgacttg
cttcaaaacagagaagccatgaaaaagaaaagtagaggtcggaagcgaaaacgaaggagg
cactcaagaatgggaaccaaaagacgttcagaagctaatgttgcgtccgagactgatgag
aagtttgggttccattcaggatcagactttacatttgaagagtttcagagatatgcctat
actttcaaggagagttacttcagatcaaaggatgctaaggagggttcaaattctggtgaa
actagaagcaaaatatggaaaccctctgtggaagatattgaaggtgaatactggcgaata
gttgagcaaccaacagacgaggttgaggtttactatggagctgacttggaaacaggagtg
tttggaagtgggtttcctaaggcattgtctatggtaaccaaaagtgattcggatcagtat
gcaatgtctggttggaatctaaataatttcccacgccttcctggttctgtactgtctttt
gaagcaagcgacatctcaggagttctagtcccatggctctatgttgggatgtgcttttct
tcattttgttggcatgttgaggaccaccacctctattccctaaattatctgcactggggt
gacccaaaagtatggtatggagtgtctggaagtcgtgctcaatctttggaatgtgcaatg
agaaagcatttgccggatttattcgaggaacaacctgatttactcaatgaactggtcact
cagctatctccttcagttttaaagtctgaaggtgtacctgtgtatcgagctgtccaacat
tctggggagtttattcttacctttccaagggcataccattctggatttaattgtggcttt
aactgtgccgaggcagtgaacgtggcccctgtcgattggttagaacatgggcaaaatgca
gttgagctatacagtgagcagtgtcgcaagacatcaatctcacacgacaaattgttactg
ggatcagcacaggaagctgtacaggctctttgggagctatcagttcttggaaagaaaact
acaagaaatttgagctggcaaaatgtttgtggcaaaggtggtgtcctcaccagagcagtt
aagacacgagtgcaaatggaggaggaaagactagatcgtcttccaatttgtttgaagttg
caaaagatggaaagagactttgatttgaatgagagagaatgtttttcttgcttctatgac
ttacacttatctgctgccagctgcaaatgctctcctgatcgattttcatgtctcaaacat
gcaaagcatttttgttcatgtgacatcagtcataaatatgtccttcaacgccacactatc
agtgaattaaatatgctggttgaagcattggaagggagagtagaagccatgaaagtatgg
gcatccaaggaccctgtagtagtttctatagacggtactggttggcgtaccactaagttg
gatcaagaaagtagcatgtctcataagagagtcaagtcttgtaatccaagggaaacttca
tcttgttgtcctgtttcagaagagaaggtcaacataaatgcatcttgcagttcgtctagt
caagtttcttctgcggttgtccagtcagggtcacagcatggagcttttagtttaagtgca
tctcgcatcactatggataggcaaaatgacgatgaaactctggccatgaatgatgaggaa
aagatggggaatgagtgctgttttgatttaaatcttaattatatgtctgatgaacgtgaa
agcaggacgatgcacatatctgatgactttgataacaaggctgtcacaattgaggaggat
gcatctacttccgtgtctaatcaagagaaagtttgtagttcagatgtagccagagaccca
gacatgatgaaagttgataatggctaccctgcctgttcaagggacatcaggaatagttgt
gcgagtgatggcaataagctgttcggtgttgaactttgcttaccccatccttcttcaaac
aaacagtcaataaactttacaaaaactgaaactgtcgaggactcgggtgtaaacatatcc
ttgactgaccaaagctgtcaattacagaagttgagtccttcggttgagcctatagatttt
ggagctgttgtgtctggaaagttgtggtgcagtaagcaggccatgtatccaaaagggtat
agaagccgagttaaattctatagtgtgcttgacccaacaaaagtttgtagctatatttca
gaagttctcgctgctgggcttattgggcctctatttaaggttactttggaagaatgcccc
ggtgaggcttttgctaatgtatcggcagagaagtgctgggatatggtactgcagagacta
aaccaagaaataaagagacggagtagtctaggggaaagtggactgccccctttgcagcct
agcattaatggccttgaaatgtttggatttctctcccaacccattattgaggctattgag
gccctcgatcccgaccatcaatgtgtggagtactggaattacaggcatattgtcccattg
gcgtttggcaatgttagtgaaatcaagcagcattcgtttgaatcaagtagaagtctagga
gaaacagatacgaaaatttttggtattactttgacaaggctggaccgggataatccattg
gtggaaggagatcatccaaccgaagagatgcagttagtgttgcgaagactattaaagaag
gcagattccgaagagttgaggacattacagagagtattgtgcagtgagtcacaaagttca
aaatggagagtggcattcacatcattgattgaagagatccagagaaatgtagatagttaa

DBGET integrated database retrieval system