Prunus mume (Japanese apricot): 103325344
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Entry
103325344 CDS
T03196
Name
(RefSeq) protein ROOT HAIR DEFECTIVE 3 homolog 2-like
KO
K22698
protein SEY1 [EC:3.6.5.-]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103325344
Membrane trafficking [BR:
pmum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
103325344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sey1_3HB
RHD3_GTPase
GBP
Dynamin_N
MMR_HSR1
AAA_28
AAA_14
AAA_16
ABC_tran
AAA_29
Cytochrom_C_2
Motif
Other DBs
NCBI-GeneID:
103325344
NCBI-ProteinID:
XP_008225727
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Position
LG3:complement(6003696..6011203)
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AA seq
832 aa
AA seq
DB search
MEEDCCATQLIYGDGQFNSSGLDRFVKEVKLAECGLSYAVVAIMGPQSSGKSTLLNHLFH
TKFREMDAYSGRSQTTKGIWIAKCVGIEPCTIAMDLEGTDGRERGEDDTTFEKQSALFAL
AVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPFEYLE
PVLREDIQKIWDGVPKPQAHKSTPFSDFFSVEVVALSSYEEKEEKFKEEVAQLRQRFFHS
ISPGGLAGDRRGVVPATGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANQKFNQ
LVFDEDWFALEEAVQKGPVQGFGKRLSSILGTYLSEYDMEAVYFDEGVRNSKRQLLESKA
LDFVYPAYTTMLGHLRSKALEDFKVRLEQSLNKGGEFASSVRTSTQSSMLEFDKGCADAA
IQQADWDASRVREKLKRDIDAHASSVRSAKLSELNINYEKQLSASLTGPVEALLETGGKD
TWTSIRKLLNRETEVAVSKFSAAVAGFELDKDTSTKMTQNLRDYARNVVEKKAREEAANI
MIHMKDRFSTVFNYDSDSMPRVWTGKDDIRSITKDARSASLKLLSVMAAIRLEEKPDNIE
KLLFSSLMDGTVTVSSSQDGRIAASTDPLASSTWEEVSSKDTLITPVQCKSLWRQFKAET
EYSVTQAISAQEAHKRSNNWLPPPWAIMAMIVLGFNEFMLLLKNPLYLMVLFVVFLISKA
LWVQMDIAGEFQHGTLSGILSISSRFLPTVMDLLRKLAEEAQGNPAPEAPRRPVSVASQS
HRNETPPPNTISSSIPESSVSSNFSSLDGDVEYSSPPLRQRRPTNVQEVEPL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagattgctgcgccacacaactcatctatggggatggtcagtttaactcctct
gggctcgacaggttcgtcaaggaagtgaagcttgctgagtgtggactctcctatgctgtg
gttgccatcatgggtcctcagagcagtgggaagagcacgttattgaaccatctgttccac
actaagtttagggagatggatgcatacagtggaaggagccaaacaacaaagggtatttgg
atagccaagtgtgttggcattgagccttgcacgattgccatggatttggagggtactgat
ggcagggagagaggcgaggatgatactacattcgagaagcaaagtgccctatttgccctg
gcagtttcagacatcgtgctgataaatatgtggtgtcatgatataggtcgcgagcaagct
gcaaacaaacctttactgaaaacagtttttcaggtcatgatgcgcttattcagcccccgt
aaaacgacattactgtttgttatacgtgacaaaacaaagaccccgtttgaatatctggag
ccggttttgagggaagatatacagaagatatgggatggagttccgaagccccaagcccat
aaaagtacccccttcagtgatttctttagtgtagaagtagttgctttgtccagttatgaa
gagaaggaggagaagtttaaggaggaggttgctcaactgaggcaacgctttttccattct
atttctccaggagggcttgctggtgatagacggggtgttgtccctgccacaggattttcc
tttagtgcacaacagatttggaaagtaatcaaagagaacaaggacctggatcttcccgct
cacaaggttatggttgctactgttcggtgtgaagagattgccaaccagaaatttaatcag
ttagtctttgatgaggattggttcgcattggaagaagctgtccaaaagggtcccgtacaa
ggttttggtaaaaggcttagctccatcctaggcacctatctttctgaatatgacatggag
gccgtctactttgacgaaggagtaaggaactcaaaacgacaattgttggagtcaaaagca
ttggattttgtttaccctgcatacacgaccatgctgggacacctacgctctaaagcactt
gaagattttaaagtgaggctggagcaatcgttaaacaaaggaggagaatttgcttcatct
gttcgtacctctacccagtcttccatgcttgagtttgacaaaggatgtgcagatgctgcc
atacaacaagctgattgggatgcttcgagagtccgggaaaaacttaaacgtgatatagat
gctcatgcatcatccgttcgtagtgcaaagttgtcagaactgaatatcaattatgagaaa
caactttctgcatctttaactggacctgtagaggcactacttgaaactggtggaaaagac
acttggacttcaataagaaaacttcttaatcgtgaaactgaagttgcagtatcgaagttc
tcagctgcagttgctggttttgagttggacaaagatacatctaccaaaatgacgcaaaat
ttaagggattatgcaagaaatgtggttgagaaaaaagcacgagaagaggctgcaaacatt
atgatccacatgaaggatcggttctcgacagtcttcaattatgacagtgattcaatgcct
agggtttggactgggaaagatgacattagaagtattaccaaggatgcccgctccgcatct
ctaaagcttttgtcggtcatggctgccatccgcttggaggagaagccagataatattgaa
aaacttctcttttcttctttgatggatggaactgttaccgtttcatcttcgcaagatggg
agaattgcagcttctacagatcctcttgcctcaagcacttgggaagaggtttcatcaaag
gatactttaattactccagtacagtgcaagtcgttgtggagacagttcaaggcagagact
gagtatagcgtcactcaagctatttcagcccaggaggctcacaagcggagtaacaactgg
ttgcctcctccatgggctattatggcgatgattgttcttggttttaacgaatttatgctc
cttttaaagaatcctctctacctcatggttctatttgttgtatttttaatttcaaaggcc
ttatgggtacagatggacattgcgggagagttccaacatggcaccctgtcaggaatacta
tctatttcatcgaggtttcttccaactgtcatggatcttctaagaaaacttgctgaagaa
gctcagggtaatccagcacctgaagcacccaggcggccagtatcagttgcttcccagagt
catagaaatgaaacacctccgccaaacacaatatcaagttcaattcctgagtcatctgtg
tcatctaatttctcgtcattggatggtgacgtcgaatactcaagccctcccttgagacaa
aggagacctacgaacgttcaagaagtcgaaccgttgtga
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