KEGG   Prunus mume (Japanese apricot): 103325347
Entry
103325347         CDS       T03196                                 
Name
(RefSeq) ras-related protein RABF2b isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum04144  Endocytosis
pmum04145  Phagocytosis
pmum04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103325347
   04145 Phagocytosis
    103325347
   04148 Efferocytosis
    103325347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmum04131]
    103325347
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmum04147]
    103325347
   04031 GTP-binding proteins [BR:pmum04031]
    103325347
Membrane trafficking [BR:pmum04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    103325347
 Endosome - Lysosome transport
    103325347
Exosome [BR:pmum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103325347
  Exosomal proteins of other body fluids (saliva and urine)
   103325347
  Exosomal proteins of colorectal cancer cells
   103325347
  Exosomal proteins of bladder cancer cells
   103325347
GTP-binding proteins [BR:pmum04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    103325347
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA NDUS4 AAA_24 AAA_16 TsaE
Other DBs
NCBI-GeneID: 103325347
NCBI-ProteinID: XP_008225731
UniProt: A0ABM0NJJ8
LinkDB
Position
LG3:6079241..6083291
AA seq 200 aa
MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDLTNQASFERAKKWVLELKSQGNPNMVMAL
AGNKADLVEARTVAAEDAQAYAQENGLFFLETSAKTADNVNDIFYEIAKRLPRVQPVQNP
AGMVLMDRPSERVASSSCCS
NT seq 603 nt   +upstreamnt  +downstreamnt
atggccaccactgggaacaagaacatcaatgccaaattggtgcttcttggggatgttgga
gctgggaagtctagtctggtgttgcgctttgtgaaaggacaatttattgaattccaggaa
tcaaccataggtgctgccttcttctcacaaacattggctgtaaatgacgcaactgtaaaa
tttgagatttgggatacagcaggtcaagagaggtaccatagtttggctccaatgtattat
agaggagctgctgctgcaataattgtgtatgatttaacaaatcaagcctcatttgagcga
gcaaaaaaatgggtactggaactcaaatcacaaggcaatccaaacatggttatggcacta
gctgggaataaagcagatttggtagaggcaaggactgtagcagcagaggatgcacaggca
tatgctcaagagaatggccttttcttcttggaaacctctgcaaaaactgcagacaatgtg
aatgacatcttctatgagatagcaaagagattacctcgagtgcagcctgtgcagaaccct
gcaggaatggttcttatggacagaccttctgaaagggtagcaagctcatcctgttgctca
tag

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