Prunus mume (Japanese apricot): 103325443
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Entry
103325443 CDS
T03196
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X1
KO
K13338
peroxin-1
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
103325443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103325443
Membrane trafficking [BR:
pmum04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
103325443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
NACHT
NPHP3_N
AAA_5
AAA_22
RuvB_N
RNA_helicase
AAA_14
AAA_25
Mg_chelatase
ATPase_2
nSTAND3
AAA_7
AAA_19
IstB_IS21
AAA_24
Bac_DnaA
AAA_18
ATPase
NB-ARC
AAA_11
AAA_33
AAA_2
Parvo_NS1
AAA_3
TIP49
SLFN-g3_helicase
Sigma54_activat
ABC_tran
KTI12
AAA_lid_PRS2_C
DUF5003
Motif
Other DBs
NCBI-GeneID:
103325443
NCBI-ProteinID:
XP_008225827
LinkDB
All DBs
Position
LG3:6471516..6480794
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AA seq
1135 aa
AA seq
DB search
MEFEVRLVGGIENCYVSLPLALIQTLQSSSSSLPHVLALELRSSSNDSRWNVAWSGATST
SQAVEVAQQFGDCISLPDHARVQVRALSNVTKATLVTIEPSTEDDWEVLELNSELAEAAI
LNQVRIVHEAMRFPLWLHGRATITFLVVSTFPKKSVVQLVPGTEVAVAPKRRKTVNSHGD
SSTLASNGKRHISKALLRIQDPDRRLVHKSGYVKGVELGVVLTSVAMIHPETAKMLSLSS
LQLVAVVPRLSPKESMKNSENDGLRTRSSSTPKESNNGISNDKKDNRETIVRLLISDSVA
KGHVMVAQSLRLYLRARLHSWVYLKGCIGILKTDIPLLSLSPCHFKIFGKDKAVERNGIE
VLDRHKIRKKKNMLLMTGSSTYIDVTDWSTHDKVVDAFSYESSCKEDEGASQKSEEGKGV
ESLVKAWILAQLDAIASNAGEEINSLVLGNETILHFEVKGQKSGIEEKVHESSSGCLENK
NKNAELPVEILYVLTFSKESQLAGNAYELVFDERNKDNNNLGGLETIVKLKEGDPVSFYS
VRERMSEKDVPADVSSLSWMGTIACDVLNRMLVLLTPASGAWFSSHDLPLPGHVLIYGPP
GSGKTLLARTVAKCLEEDKDLLAHVVFVSCSQLAMEKALTIRQALSSYMSEALDHAPSLV
ILDDLDSIVSSSSDSEGSQTSTSVLALTEFLNDIMDEYWEKRKSSCGIGPLAFIASIKSL
ESIPQSLSSSGRFDFHVQLPAPAASQREAILKHEIQRRCLQCSDDILQDVASKCDGYDSY
DLEILVDRTVHAAIGRFMPYHFAFDKSENPTLIRDDFSRAMHDFLPVAMRDVTKSAPEGG
RTGWDDVGGLVDIRNAIKEMIELPSKFPNIFAKSPLRLRSNVLLYGPPGCGKTHIVGSAA
AACSLRFISVKGPELLNKYIGASEQAVRDIFTKAAAAAPCLLFFDEFDSIAPKRGHDNTG
VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSLGERLD
ILTVLSKKLPLDGDVDLRAIAYMTEGFSGADLQALLSDAQLAAVHEILAGLDTNDPGKKP
VINDALLKSTASKARPSVSEAEKKRLYGIYGEFLDSKRSVAAQSRDAKGKRATLA
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgaggttaggttagttgggggcatagagaactgttacgtctctcttcctctg
gccctaatccaaaccctccagtcctcgtcgtcctccctccctcatgttctcgctctggag
cttcgctcctcctcaaacgacagccgctggaatgtcgcttggtccggcgccacttccact
tctcaagctgtcgaggttgctcagcaatttggggattgcatttcgttgccagatcatgct
agggttcaagttcgtgctctttcgaatgtgacgaaggctactctggtcacaattgagcct
tctactgaggatgattgggaggttttggaacttaattctgagcttgcagaggctgctata
ttgaatcaggtgaggattgtccatgaagcaatgagatttcctctgtggttgcacggccgc
gctaccattacatttcttgttgtttcaaccttccccaagaaatcggtggtgcaactggtt
ccagggactgaagttgcagttgctccaaagagacgcaagactgtcaactcacatggagat
tcatccactcttgcttctaatggaaagcgccatatttcaaaggcactactgcgcattcaa
gatccagacaggagactagttcacaaaagtggttatgtcaaaggtgttgagcttggagtt
gttctcacttctgttgctatgattcacccagaaacagcaaaaatgttatccttaagctct
cttcagttagtagctgttgtgccaagattatcaccaaaagagagcatgaaaaattcggaa
aatgatggtttgagaacaagaagcagttcaactccaaaagaatccaacaatggaatttca
aatgacaagaaggataatcgtgaaacaattgttcggctgttgatttctgattcagtggct
aaagggcatgtaatggttgcccagtctcttcgtctttatttgagagctcgtctgcattca
tgggtttatttaaagggatgcattggtattttgaagactgacattccccttctgtcactt
tctccttgccactttaagatatttgggaaagacaaagctgttgaaagaaatggtatagaa
gttctcgataggcataaaattcgtaagaagaaaaacatgcttctaatgaccgggtcaagc
acctacatagatgttactgattggtcaacccatgacaaagttgttgatgctttttcatat
gaatcttcttgcaaagaggatgaaggggctagtcagaagtctgaggagggaaagggagta
gaaagtcttgttaaagcatggatccttgcacaacttgatgctattgcttccaatgcagga
gaagaaattaattccttggttttgggaaatgaaactatacttcactttgaagtgaaagga
cagaaatctgggattgaggagaaggtacatgaatcatcaagtggctgcctcgaaaacaaa
aataagaatgctgaactaccagttgaaatattatatgtattgacattttccaaggaatct
caacttgctggaaatgcatatgagcttgtatttgatgaaagaaacaaagacaacaataat
cttggaggtctagagacaattgtaaagctgaaggagggcgatcctgtgtctttttattca
gtaagagagagaatgtctgaaaaagatgtccctgctgatgtatcatccttgagctggatg
gggacaattgcttgtgacgttttaaatagaatgttggtgttgttaactcctgcttctggg
gcatggttcagttcacacgatcttcctctccctggacatgttctgatatatggacctcct
ggttctggaaagacattattagcaagaactgttgcaaagtgtctcgaagaagataaagac
ctcttagcacacgtagtttttgtatcttgttcacaacttgccatggaaaaggccttgacc
attcgccaagcactttcaagctatatgtctgaggctttagatcatgctccatctcttgta
attcttgacgatcttgatagcattgtttcatcctcttcagactcagaaggatctcaaact
tcaacctctgttcttgctctgacagaatttctcaacgacattatggatgaatattgggaa
aaaaggaagagctcgtgtggaattggtccccttgcattcatagcttcaataaagtcttta
gagagtataccgcaatcattgagctcttcaggaaggttcgactttcacgtgcaattgcct
gctcctgctgcctcacaacgtgaagccattttgaagcatgaaattcagaggcgttgctta
caatgttctgatgatatcttacaagatgtagcctcaaaatgtgatggctatgattcatat
gatctggaaatcttggtcgatagaactgttcatgctgccataggtcgttttatgccttat
cattttgcttttgacaaaagtgaaaatcccactttaataagggatgatttctctcgggca
atgcatgatttccttccggttgccatgcgcgacgtcactaaatctgctcctgaaggtggt
cggactgggtgggacgatgttggtggtcttgttgacattcgcaatgcaattaaagagatg
attgaattgccttcaaaattcccaaacatctttgcaaaatctcctttaaggttgcggtcc
aatgttctattgtatgggcctcctggctgtggaaagacacatatagttggttctgctgct
gcagcctgttcactacgatttatatcagtcaaaggacctgagctgttgaataaatatatt
ggtgcttcagagcaagctgtccgggatatattcaccaaagctgctgctgcagcaccatgc
cttctcttttttgacgaatttgattctatagcccccaaaagaggacatgacaatactgga
gtaactgatcgtgttgtcaatcagtttctgactgaattggatggtgttgaagttttgact
ggtgtttttgtgtttgctgcgacaagtagaccagatttacttgatgctgcactgttgaga
cctggtaggctagatcgccttctattttgtgattttccatctctgggtgaaaggttggat
attttgacggtcctttcaaaaaagctaccactggatggtgatgtggatttaagagccata
gcttatatgactgagggatttagtggggctgaccttcaagctcttctctcagatgctcag
cttgcagcagtgcatgaaattctggctggtttagataccaatgatccagggaaaaagcca
gttattaatgatgctctcttgaagtctactgcttccaaggcaaggccatctgtttccgaa
gctgagaagaaaagattgtatggcatttatggcgagttcttggattcaaaaagatctgtt
gctgcacagtcgagagatgcaaaaggcaagagggcaaccctagcatga
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integrated database retrieval system
