Prunus mume (Japanese apricot): 103325458
Help
Entry
103325458 CDS
T03196
Name
(RefSeq) protein ROOT HAIR DEFECTIVE 3 homolog 2-like isoform X2
KO
K22698
protein SEY1 [EC:3.6.5.-]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103325458
Membrane trafficking [BR:
pmum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
103325458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sey1_3HB
RHD3_GTPase
GBP
Dynamin_N
MMR_HSR1
AAA_28
AAA_14
AAA_29
AAA_16
ABC_tran
Cytochrom_C_2
Motif
Other DBs
NCBI-GeneID:
103325458
NCBI-ProteinID:
XP_008225846
LinkDB
All DBs
Position
LG3:6627320..6634487
Genome browser
AA seq
831 aa
AA seq
DB search
MEEDCCATQLIYGDGEFNSSGLDRFVKEVKLAECGLSYAVVAIMGPQSSGKSTLLNHLFH
TKFREMDAYSGRSQTTKGIWIAKCVGIEPCTIAMDLEGTDGRERGEDDTTFEKQSALFAL
AVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPFEYLE
PVLREDIQKIWDGVPKPQAHKSTPFSDFFSVEVVALSSYEEEEKFKEEVAQLRQRFFHSI
SPGGLAGDRRGVVPATGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANQKSNQL
VYDEDWLALKEAVQTGPVQGFGIRLSSILGTYLSEYDMEAVYFDEGVRNAKRQLLESKAL
DFVYPAYTTMLGHLRSKALEDFKVRLEQSLNKGGEFASSVRTSSQSSMLEFDKGCADAAI
QQADWDGSRVREKLKRDIDAHASSVRSAKLSELKINYEKQLSASLTGPVEALLETGGKDT
WTSIRKLLNHETEVAVSEFSAAVAGFELDKDTSTKMNQNLRDYARNVVEKKAQEEAGNIM
IHMKDRFSTVFNYDSDSMPRVWTEKEDIRSITKDARSASLKLLSVMAAIRMESKPDNIEK
LLFSSLMDGTVTVSSSQDRRVAASTYPLASSTWEEVSSKDTLITPVQCKSLWRQFKAETE
YSVTQAISAQEAHKQSNNWWPPLWTILVMIVLGFNEIILLITNPLYLVVLFVAFLISTAL
WVQMGIARVFQHGILSGILSIVSRFLPTVMDLLRKLAEKSQGNPAPEAPRRPVSVASQSH
RNETPLPNTVSCSIPESTVSSNMSSSDGGVEYSSPPLRQRRPTNVQEVEPS
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagattgctgcgccacacaactcatctatggagatggtgagtttaactcttct
gggctcgacaggttcgtcaaggaagtgaagcttgctgagtgtggactctcctatgctgtt
gttgccatcatgggtcctcagagcagcgggaagagcactttattgaaccatctgttccac
actaagtttagagagatggatgcatacagtggaaggagccaaacaactaagggtatttgg
atagccaagtgtgttggcattgagccttgcacgattgccatggatttggagggtaccgat
ggcagggagagaggcgaggatgatactacattcgagaagcaaagcgccctatttgccctg
gcagtttcagacattgtgctgataaatatgtggtgtcatgatataggtcgcgagcaagct
gcaaacaaacctttactgaaaacagtttttcaggtcatgatgcgcttattcagcccccgt
aaaacgacgttactgtttgttatacgtgataaaacgaagaccccgtttgaatatctggag
ccggttttgagggaagatatacagaagatatgggatggagttccgaagccccaagcccat
aaaagtacccccttcagtgatttctttagtgtagaagtagttgctttgtccagttatgaa
gaggaggagaagtttaaggaggaggttgctcaactgaggcagcgctttttccattctatt
tctccaggagggcttgctggtgatagacggggtgttgtccctgccacaggattttccttt
agtgcacaacagatttggaaagtaatcaaagagaacaaggacctggatcttcctgctcac
aaggttatggttgctactgttcggtgtgaagagattgccaaccagaaatctaatcagtta
gtctatgatgaggattggttggcattgaaagaagctgtccaaactggtcccgtacaaggt
tttggtataaggctcagctccatcctaggcacctatctttctgaatatgacatggaggcc
gtctactttgatgaaggtgtaaggaacgcaaaacgacaattattggagtcaaaagcattg
gattttgtttaccctgcatacacgaccatgctgggacacctgcgttctaaagcacttgaa
gattttaaagtgaggctggagcaatcgttaaacaaaggaggagaatttgcttcatctgtt
cgtacctctagtcagtcttccatgcttgagtttgacaaaggatgtgcagatgctgccata
caacaagctgattgggatggttcaagagtcagggaaaaacttaaacgtgatatagatgct
catgcatcatccgttcgtagtgcaaagttgtcagaactgaaaatcaattatgagaaacaa
ctttctgcatctttaactggacctgtagaggcactacttgaaactggtggaaaagacact
tggacttcaataagaaaacttcttaatcatgaaactgaagttgcagtatcagagttctca
gctgcagttgctggttttgagttggacaaagatacatctaccaaaatgaatcaaaattta
agggattatgcaagaaatgtggttgagaaaaaagcacaagaagaggctggaaacattatg
atccacatgaaggatcggttctcgacagtcttcaattatgacagtgattcaatgccaagg
gtttggactgagaaagaagacattagaagtattaccaaggatgcccgctccgcgtctcta
aagcttttgtcggtcatggctgccatccgcatggagtcaaagccagataatattgaaaaa
cttctcttttcttctttgatggatggaactgttactgtttcatcttcgcaagataggaga
gtagcagcttctacatatcctcttgcctcaagcacttgggaagaggtttcatcaaaggat
actttaattactccagtacagtgcaagtcgttgtggagacagttcaaggcagagactgag
tatagtgtcactcaagctatttcagcccaggaggctcacaagcagagtaacaactggtgg
cctcctctatggactattttggtgatgattgttcttggttttaacgaaattattctcctt
ataacgaaccctctctacctcgtggttctatttgttgcatttttaatttcaacggcctta
tgggtacagatgggcattgcgagagtgttccaacatggcatcctgtcaggaatactatct
atcgtatcgaggtttcttccaactgttatggatcttttaagaaaacttgcagaaaaatct
cagggtaatccagcacctgaagcacccaggcggccagtttctgttgcttcccagagtcat
agaaatgaaacacctctgccaaacacagtatcatgctcaattcctgagtcaactgtgtca
tctaatatgtcgtcatcggatggtggcgtcgaatactcaagccctcccttgagacaaagg
cgacctacaaacgttcaagaagttgaaccgtcatga
DBGET
integrated database retrieval system
