Prunus mume (Japanese apricot): 103325463
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Entry
103325463 CDS
T03196
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103325463
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmum04040
]
103325463
Ion channels [BR:
pmum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103325463
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GFIT
Motif
Pfam:
cNMP_binding
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
103325463
NCBI-ProteinID:
XP_016648193
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Position
LG3:6319972..6324973
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AA seq
586 aa
AA seq
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MERLRSYNNWWEMEDGEYTRPPSEHWSFDTEDHPDVGFYEGLDGHASRKKETLGRMFFSP
LTRKRIFLLSCVAVSIDPLFFYIPIINDEKKCLAIDKNLRTAALCLRALLDAVFALHTMS
SGFRLYPYKELYFVDVLLYSFRSILVAVFLMLPIPQLAISVFFFKSGGSGYFGQRLTVSI
FLFLCYAARLVLIYMLSQELKYNTGLWVRASVNFFFYMVASNILGGFWYFFSIQREISCW
QMQSCKNSLGCGATYYCGDSTSRDITFLNELCPINPQNITVFNFGIFLEAIQSGSTRSMH
FPTKFFYGVWWGVRNLSNFGTNLETSGYVWETCFAVVISIAGLLLFLCLIGSVQIYMEQA
KTKSLEAEEKLKELNTKILQCKKMIRKWISDIAEGDNALEKNIWQQINENKLVEHRDAVK
VDVNYMFSILHYYGRNLLKRHFCMEILKKVGGLRDMGEEMLKIICNKMKLRTFEENTLVV
EAAHPLERMMIIIEGSLRMYQTTSDAAAAPPPQTVFEEGDIVGHELVSWAASIRNFKDPP
TSNTYVKCLSKVTAFVLTSEDLRKLLSSKRIMFGTRAEPEVFQWMR
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggttacgttcttacaataactggtgggagatggaagacggagagtatacccgt
cctcccagcgagcattggtcgttcgatacagaagaccatccagatgtgggtttttatgag
ggtttagacggtcatgcatcaaggaaaaaagagacgcttgggcgcatgttcttttctcca
ttaacaaggaaaaggatatttttattatcatgtgttgcagtgtccatagatcctctcttc
ttttacattccaatcatcaatgacgagaaaaagtgccttgcaattgacaaaaacttgagg
actgcagctctttgtttgcgagcacttcttgatgccgttttcgcactgcatactatgagt
tctgggtttaggttgtatccgtataaggagctctactttgtagatgtacttttgtacagc
tttcgcagcatactagttgccgttttccttatgctccccattccgcagttggcaatatca
gttttctttttcaagtcaggaggctctggatatttcggccaaagactgaccgtgagcatc
ttcctttttctctgttatgcggcaaggcttgtcctaatctacatgctaagtcaagaactc
aagtacaataccggattatgggttcgagcttcagtcaatttctttttctacatggttgct
agtaatatacttggaggcttttggtacttcttttctattcaacgtgagatatcatgctgg
caaatgcaatcctgtaaaaattctctaggctgtggagctacttattattgtggcgacagt
acttcacgagacataacattcctaaatgagttatgccccataaatccacaaaatattacc
gtatttaattttggaatatttcttgaagctattcagtccggaagcacaagatcgatgcat
tttccaaccaagttcttttatggtgtatggtggggcgtcagaaatctaagtaactttggc
acgaatctggaaacaagtggctatgtatgggaaacctgctttgcagttgtaatttctatt
gctggtttgctactatttttatgtctcattggaagcgtgcagatatatatggagcaggca
aaaacaaaatcgttggaagctgaggagaagctaaaggagttgaacaccaagatacttcaa
tgcaaaaagatgatacgaaaatggatatcagatatagcagaaggtgacaacgctttggaa
aaaaatatttggcaacaaataaatgaaaacaaattagtagaacacagagatgctgttaaa
gtggatgtgaattatatgttctctattcttcattactatgggagaaaccttctcaagcgc
catttctgcatggagatcctaaaaaaagtaggcggtcttagagatatgggggaagaaatg
ttgaaaattatctgcaacaaaatgaagctaaggacgttcgaggagaatacgttggttgtt
gaagcggcacacccgcttgagcggatgatgattattatagaaggctctctgcggatgtac
cagacaactagtgatgctgctgctgcacctcctccccaaactgttttcgaggaaggtgat
attgtgggacatgaacttgtgtcttgggcagcgtcaatccgaaattttaaagacccccct
acttccaacacatatgtcaaatgcctctccaaagtaacagccttcgttctcacaagtgag
gacttgagaaaattactcagctccaaacgcatcatgttcgggacaagggcggaaccagaa
gtttttcagtggatgcgctag
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