Prunus mume (Japanese apricot): 103325513
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Entry
103325513 CDS
T03196
Name
(RefSeq) DNA polymerase eta isoform X1
KO
K03509
DNA polymerase eta [EC:
2.7.7.7
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
103325513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103325513
Enzymes [BR:
pmum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103325513
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
103325513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
POLH-Rev1_HhH
IMS_C
IMS_HHH_1
UBM
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
103325513
NCBI-ProteinID:
XP_008225911
LinkDB
All DBs
Position
LG3:6992280..7000560
Genome browser
AA seq
724 aa
AA seq
DB search
MEEFLSSYCPMIAICGLVSMPSLLYFIVEQRKQPDLRGLPTAVVQYNAWKGGALIAVSYE
ARKCGVKRSMRGAESKQVCPQIQLVQVPVARGKADLSTYRNAGSEVVSILSRKGRCERAS
IDEVYLDLTDAAETMLAEAPPEILEVIDEEVLKSHVLGLNSEDGSDAKESVRKWLCRNDA
DRRDKLLACGAFIIAELRLQVLKETEFTCSAGIAHNKILAKLASGMNKPAQQTVVPFSSV
KGLLGSLPIKKMKQLGGKLGDSLQSDLGVNTVGDLLQFSEEKLQERYGVNTGTWLWNIAR
GISGDEVEGRLLPKSHGSGKTFPGPQALKTIASVQRWLHELCEELSERLQLDLDQNKRIA
HTLVLHATAYKVSDSDSHKKFPSKSCPLRYGTAKIQEDALSLFQAALREYLGSYTAKIQG
SQNNHWGITSLSVSASKIVPIPSGTASITKYFHGHPSCSSTKQSQNNLVEEGTPVPPSGN
ESYSEVNVTKPQIEFPGEETMIKYAETSSDQLEDKIDLLNDQNPCCSSKNQARDEFTQET
VPVSTSGSEHCSGMNQNQPMKNYSGEEPYVKLSMPSLNRQEQKRKAVKDKGTCSILRFFK
NQDPSCAPQKLEHVENIEDVKAPPLSPGIQSRSNNCLDHNRSELPKERPSEDAGNSNVCG
SFQIEQRRGGAWSYNIDEIDPSVIDELPPEIQQEVRAWIRPHKRHNTVKRGSSIAHYFLP
TKNT
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatttttatcttcttactgccccatgattgctatatgtggacttgtatctatg
ccaagtttgctttattttatagtggagcaaaggaaacaaccagatttaaggggcttacca
acagcagtggtacagtataacgcatggaaaggtggggccttgattgctgtcagctatgag
gcccgaaaatgtggtgttaaacgatcgatgagaggtgctgagtcaaagcaagtctgcccg
caaattcagttggtccaagtcccagtagcacgtggtaaagctgacctgagcacataccgc
aatgcgggctcagaggtggtttctattttgtcaaggaagggtcgatgtgagagggcttca
attgacgaagtgtatcttgaccttaccgatgcagcagaaacaatgttagctgaagctcct
ccagaaatcttggaagtaattgatgaggaagttctcaagtcccatgttttggggctcaat
agtgaggacggcagtgatgccaaagaaagtgtgagaaaatggctttgcaggaatgatgct
gatcgccgtgataaactattagcttgtggggcattcattattgcagaacttaggttgcaa
gtgttgaaggagacagaatttacctgttctgctggcattgctcataataagatactggcc
aaacttgcaagtggtatgaataaacctgcgcaacaaactgttgttccattctcatctgtg
aaaggattgctagggtccttgccaattaagaaaatgaaacagctaggaggaaaactgggg
gattcgttacaaagtgacctgggtgttaacactgttggtgatctattgcagttttcagag
gaaaagctacaagaacgttatggagtcaatactggtacctggttatggaacattgctaga
gggataagtggggatgaagttgaggggcgccttcttccaaagagccatggttctgggaag
acatttcctggacctcaggctttgaagacgattgcttctgttcaacgttggctccatgaa
ctttgtgaggaattaagtgaacgccttcaattggacttggaccaaaacaaaaggattgct
cacacactagtgttgcatgctactgcatacaaagtcagtgattcagattcacacaagaag
tttccttcgaagtcttgtcccctaaggtatgggactgccaagatacaagaagatgctctt
agtctttttcaagctgcattacgagaatacttgggttcgtacacagccaaaattcaagga
agtcagaacaaccattggggaataacatctctttctgtttcagctagtaaaattgttccc
ataccatctggaacagcttcaatcactaaatactttcatggccatccatcctgctcttcg
acaaagcaatcacagaataacctcgttgaagaaggtactcctgtgccaccttcaggcaat
gaaagctactcggaggtgaatgtaacgaagccacagattgagttccctggtgaagaaacc
atgatcaagtatgctgagactagttctgatcaactggaagacaaaatagatttgttgaat
gatcagaatccatgttgctcttcaaaaaatcaggcacgtgatgaattcacccaggaaact
gtaccggtatcaacctcaggaagcgaacactgctcaggaatgaatcaaaaccaaccgatg
aaaaattattccggggaagaaccttacgttaaactttccatgcctagtctcaatagacag
gagcagaaaagaaaagcagtgaaagacaagggaacgtgctcaatattaagattctttaag
aatcaagatccatcttgtgctccacaaaagctagaacatgttgaaaatattgaagatgtc
aaagcaccaccactatctcctggtattcagtctcgaagtaataattgtttggatcataat
cgatccgagttgccaaaagaaagaccttctgaagacgctgggaattctaatgtctgtggt
tcatttcaaattgaacaaagaaggggaggagcatggagttacaatattgatgaaattgac
ccctcagtcattgacgagttaccaccagaaattcaacaagaagttcgtgcctggatcagg
cctcacaagcggcataacacggtgaaacggggttctagcattgctcattatttcttacca
accaagaacacatag
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