Prunus mume (Japanese apricot): 103325604
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Entry
103325604 CDS
T03196
Name
(RefSeq) DDB1- and CUL4-associated factor 4
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103325604
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103325604
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_DCAF4
WD40
WD40_Prp19
WD40_CDC20-Fz
EIF3I
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WDR90_beta-prop_4th
Gryzun-like
Beta-prop_LRRK2
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
103325604
NCBI-ProteinID:
XP_016648418
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All DBs
Position
LG3:7139819..7147591
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AA seq
517 aa
AA seq
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MAGELPGFYYDAEKNRYFPTKGPIPGSRRVTTAASSSSAQTPAQVSNSCRRTRVKTSKLL
HDRELCGNLIASSKGRCNFYEEFQKAQVSHPVVWKYQGTNQLGDGALERIRMDVQTGEGL
TDTDFVLAGGADGSLSIFEVGKVGQGLEYGMKCKADRVWPLLNESQLECSEVPGHIWRPA
QATPRMPSNISRIKLFGKQSPGTEDESSRTQHMLVSTLGCERAGGSLVVINLVELLNFNP
NRLVLRRNIYEIATFNCTIWTADCEPDGSRAVIGTNLGAALVDLETGRASWLLRSKSDVL
AQQLVHSGNPSLFIIVXXXXNGAIATVDVREKQEAFPARQVRHRMRPSPLDNTLGKSSKQ
SFKLSRNMNPSHSTKMPSSIASLVSLRFDDQYFLASSMDGTVKLYDQRIIQRGAVQSYEG
HVNSHTRMQLGVDPSERFFMSGGEDCNLRIWSIKSGELLFEDKFSKTVPSTVCWRNAERF
NGEQDERRSYEYLDAKTYGLGAWIGSREGLFYMHWQV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaacttcctgggttttactatgatgcggaaaagaacaggtacttccccacc
aaaggtccaatacccggctcccgtcgtgtgacaactgctgcttcttcttccagcgctcaa
acaccggcccaggtgagcaattcatgtaggcgaaccagagtaaaaacttctaagctgctt
catgacagggagttatgtggtaatctcatcgcttccagtaaaggaaggtgtaacttttat
gaggaattccaaaaggcgcaagtatcccatcctgtggtttggaaatatcagggaacaaat
caattaggtgatggtgctttggagcggatccgcatggatgtacagacaggagagggacta
actgatacggactttgtattagcaggtggcgctgatggctctttaagtatttttgaagtt
gggaaagttgggcagggtcttgagtacgggatgaaatgtaaggcagatcgtgtctggcca
ctgttgaacgaaagtcaactagagtgtagtgaagtgcctgggcacatatggagaccagct
caagctacaccacgaatgccatcgaatatatctcgtataaaattgtttggaaagcagtct
cctggcacagaagatgaaagctcacgcacccagcatatgttggtatcaacgttgggatgt
gagagggctggtgggagtcttgtggttattaaccttgttgaactactaaattttaatcca
aataggcttgtcttaaggcgaaacatttatgagattgcaactttcaactgcactatttgg
actgcagattgtgaacctgatgggagtcgtgcagtgattggaaccaacctgggagctgct
ttggtggatttggaaactgggagggcatcatggctgttacgcagtaaaagtgatgttttg
gcacaacaactcgttcactcggggaacccatctttgtttattattgtannnnnnnnnnga
aatggagcaattgcaacagttgatgttcgtgagaaacaggaagcatttcctgcaagacaa
gttagacatagaatgcgcccctcacctttggataacactcttggaaaatctagtaaacaa
tcgtttaagctttccagaaatatgaatccttctcatagcactaaaatgccttcatctatt
gcaagtttggtatcgcttcggtttgatgaccagtacttcttggcaagctccatggatgga
acagtgaagctttatgaccaacggataatccaaagaggagctgtacaatcttatgagggg
catgtgaattcccatactcgtatgcagcttggagttgacccatctgagagattttttatg
tcaggtggagaggactgcaatttacgaatttggagtatcaagtctggtgaactgcttttt
gaggataaattctctaaaacagtcccctcaactgtgtgctggcggaacgctgaacggttt
aacggagagcaggatgaaaggcgaagctatgaataccttgatgccaaaacttatggtttg
ggggcatggattggatcgcgtgaaggactattttacatgcactggcaagtgtga
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