Prunus mume (Japanese apricot): 103325730
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Entry
103325730 CDS
T03196
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103325730
Membrane trafficking [BR:
pmum04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
103325730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
103325730
NCBI-ProteinID:
XP_008226135
LinkDB
All DBs
Position
LG3:complement(8996118..9013083)
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AA seq
1832 aa
AA seq
DB search
MLNLRPRRDSTPYTTKWQNKFEENLEQWPHLKELVQCYTTDWVKDENKYGHYESVGPPSF
QNQIYEGPDTDIETEMHLSSARRTKVDDTTDDDVPSTSGRQFMDATVSDSVHSNDPKHFG
QSPLPAYEPAFDWENERSMIFGQRVPETPISHGLKISVKVLSLSFQAGLAEPFYGTICLY
NRERREKLSEDFYFRHAPTEKKDISFEPRGIFYLDAPSSSVCLLIQLEKHATEEGGVTPS
VYSRKEPVHLTEKEKQKLQVWSQIMPYRESFAWAVVSLFDNSIGAASGGSASPSSPLAAS
ISGSSSHEGVFEPSAKVTLDGKLGYSSRSSVVVEISNLNKVKECYTEDSLQDPKRKIHKP
VKGVLRLEIEKHQNDHVDMENISESGSMTNDSIDDRITDSTFGKLPSNGLDGPQGSSSKW
NSFDAKEISGNGSNTHGNSVPSSDDFQAFDFRTTTRNEPFLQLFHCLYVYPMTVSLSRKR
NLFIRVELREDDNDIRRQPLEAMYPREPSASLQKWAHTQLTVGARVACYHDEIKLSLPAT
WTPTHHLLFTFFHVDLQTKLEAPKPIVIGYAALPLSTHAQLRSEISLPIMRELVPHYLQD
MGRERLDYLEDGKNIFRLRLRLCSSLYPINERIRDFFLEYDRHTLRTSAPWGSELLEAIN
SLKNVDSIALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRVQQESVDDAERNHF
LVNYVDYVFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVK
SMALEKMRLFYHNLPLGEEIPPMQLKEGVFRCIMQLYDCLLTEVHERCKKGLSLAKRLNS
SLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQLVLHDCKLTFLQIICDHDLFVEMPGR
DPSDRNYLSSVLIQELFLTWDHDDLSLRAKAARILVVLLCKHEFDARYQKPEDKLYIAQL
YFPLIGQILDEMPVFYNLNAVEKREVLVAILQIVRNLDDASLVKAWQQSIARTRLFFKLM
EECLVLFEHRKPADGMLMGSSSRSPVGDGPASPKYSDRLSPAINNYLSEASRQEVRPQGT
PENGYSWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHPILRQKLELWEEN
LSASVSLQVLEITEKFSTMAASHSIATDYGKFDCVTAIFMSFFSRNQPLSFWRSLLPVFN
SVFNLHGANLMARENDRFLKQVTFHLLRLAVFRNDNIRKRAVMGLQMLIRSSFYYFMQTA
RLRVMLIITLSELMSDVQVTQMKSDGTLEESGEARRLRQSLEEVADASKSPSLLRVCGLP
ESALLDIPERMTENRWSWSEVKYLSESLLLALDASLEHALLGSLMTMDRYAAAESFYRLA
MAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGIVMQALVARNDGVWSKDHITA
LRKICPMVSNEISSETSAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELFHFCASILEL
VIPVYKSRRAYGQLSKCHTMLTNIYESILEQESSPIPFTDATYYRVGFYSDRFGKLDRKE
YVYREARDVRLGDIMEKLSHIYESRMDGNHTLHIIPDSRQVKADELQPGVCYLQITAVDP
VMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEG
SFPALVNRLLVTKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRI
LQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIG
EEDQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacctgcggcctcgccgcgattccactccgtacacgaccaaatggcaaaacaag
tttgaggagaatttggagcaatggccacatctgaaggagctggtacagtgctacacaaca
gactgggtgaaggatgagaacaagtatggtcactacgagagtgttggaccgccttcattt
cagaaccagatttatgagggtcctgacactgatattgagactgaaatgcacctttcaagt
gcaaggcgaaccaaggtggatgatactactgatgatgatgtcccaagtacctcgggacga
caatttatggacgctactgtatccgattcagtgcactccaatgatccaaagcattttggt
caatctcccctccctgcctacgaaccagcttttgattgggaaaatgaaaggtcaatgata
tttggccaaagggttcctgaaacaccaatatctcatggattgaagatctcagtgaaagtt
ctgtccctatcttttcaagcgggattagcagaaccattttatggaacaatttgcttatac
aatagggagagaagagaaaaactgtcagaggacttctattttcgtcatgcaccaaccgaa
aagaaggatatttcttttgaacctcgtggaatcttctatttggatgctccatcatcttct
gtttgtctgctaatccagttagagaagcatgccacagaagaaggcggggttacaccttca
gtttattctcgtaaagaaccagtacacttgaccgagaaagaaaagcaaaaactgcaggtg
tggtctcaaataatgccttacagagagtccttcgcctgggctgttgtttcattatttgat
aacagcattggtgcagcttctggtgggtctgcttcaccaagcagtcctcttgctgctagt
atatctggttcaagttctcatgagggtgtgtttgagcctagtgcaaaggttacattagat
gggaagctaggttattcaagtcgaagctctgttgttgttgaaatatcaaatttaaataaa
gtcaaagaatgctatactgaggactcacttcaggatcccaaacgcaagatccacaaacct
gtgaaaggtgttttgagacttgaaatcgagaagcaccagaatgaccatgttgacatggaa
aatatatcagaaagtggtagtatgaccaatgattctattgatgatcgcattactgattcc
acatttgggaagctcccaagtaatggtttggatggtcctcagggtagcagctctaagtgg
aattctttcgatgccaaagaaatatctggaaatggatcaaatactcatggaaattcagtt
cccagttctgatgattttcaagctttcgacttccgtactacaacaagaaatgagcctttc
ttgcagctttttcattgtctgtatgtgtatcctatgactgttagtttaagtcggaagagg
aatttgttcataagagttgaacttcgggaggatgataatgatattcgtaggcagccttta
gaggcaatgtatccacgggagccaagtgcatcacttcagaagtgggctcacacacaattg
actgttggggcaagggtggcctgctaccatgatgaaataaaactctctctccctgccacc
tggacaccaacacatcatcttttatttactttttttcatgttgatcttcaaacaaaatta
gaagctccaaagccgatagtaattggatacgcggcacttccattatccacacatgctcag
ttgcgctctgaaatttctttgccaattatgagggagctggttccacattatctccaggat
atgggcagagagaggttggattatttggaagatggaaagaatatatttcgattgcgctta
aggctttgttcgtcgttatatcctatcaatgagcgcataagagattttttccttgaatac
gataggcacactcttcgaacaagcgcaccttggggttctgaacttctggaggctattaac
agtttgaagaatgttgattccattgctttgcttcagtttcttcatccaattttgaatatg
cttctccatctaataggcaatggcggagaaaccctccaggttgctgcattcagagccatg
gttaatatcgtgacccgggtacagcaggagtcagttgatgatgctgaaagaaatcacttc
ctagttaactatgttgattatgtgtttgatgactttggaggtcgtcaaccaccagtttat
cctggcctgtcaactgtttggggaagcttggctcgtagtaaggctaaaggataccgtgtt
ggacctgtgtatgatgacgttttggcaatggcttggtttttccttgagctaattgtcaag
tcaatggcattggagaagatgcgtcttttctatcataatcttccattaggtgaagagatt
ccgcctatgcaattgaaagaaggtgtattcagatgcataatgcagttgtatgattgccta
ctaacagaagtgcatgaacgttgtaagaaaggattaagcttggcaaagcgtttaaacagc
agtttggctttcttttgttatgatctcttgtccatcatcgaacctcgccaagtttttgaa
ttggtgtccttgtacttggacaagttttctggggtatgtcaattggttctgcatgattgc
aagctcacatttttgcaaattatatgtgatcatgacctttttgtggaaatgcctgggaga
gacccttctgataggaactacctttcgtctgttctaatacaagagctatttcttacttgg
gatcatgatgatttatctctgcgggcaaaggcggctagaattttagtagtccttttgtgc
aagcatgagtttgatgctcgataccaaaagcctgaagataaactttatattgcgcagcta
tattttccacttatcggacagattctagatgaaatgcctgtgttttacaacctcaatgct
gttgaaaagcgtgaagttttagttgctattttgcaaattgtccggaaccttgatgatgca
tcacttgtcaaggcgtggcagcaaagcattgctagaactagattatttttcaaactcatg
gaggaatgccttgttctatttgagcacagaaaacctgctgatggcatgcttatgggatct
agttctcgcagtcctgttggtgatggccctgcttcccccaagtattctgacagactctct
cctgcgatcaacaactatctgtctgaggcatctagacaagaagtcagacctcagggtaca
cctgaaaatgggtattcatggcagagagtaaattctcagttgagttcccctagccagcca
tattccttaagagaagctctggctcaggcacaatcctctagaattggagcttctgctcaa
gcactaagagaatctttgcatccaatattgagacaaaaattggagctctgggaagaaaac
ttgagtgcttctgtcagtcttcaggttttggaaataactgagaagttttccacaatggca
gcatcccatagcattgccactgactatggaaaatttgattgcgtcacagctatattcatg
agcttcttctctcgaaatcaaccattgtctttctggagatcactgcttcctgtcttcaac
agtgtcttcaatcttcatggtgcaaatttgatggcaagggaaaatgaccgttttttaaag
caagtcactttccatcttcttcgacttgctgtgtttcgaaatgataatatcagaaaaagg
gctgttatggggctccagatgcttataaggagttctttctactactttatgcagacagca
aggttgagggtcatgctgatcatcacattgtcagagttgatgtctgatgtacaagtgact
cagatgaagtctgatggaacactagaagagagtggtgaagcaaggcgtcttcggcaatca
ctggaggaagtggcagatgcctctaagagccccagtcttttgagagtgtgtggacttcct
gagagtgctctgttagacattccagaaagaatgacagaaaatagatggtcctggtcagaa
gtgaagtatctctccgaaagtcttcttcttgctcttgatgccagcttggaacatgcactc
ctgggctctttgatgactatggacagatatgcagctgcagaaagcttctatagactggct
atggcatttgcccctgtcccagatcttcacataatgtggttactgcatttatgtgatgca
catcaagaaatgcagtcttgggcagaagctgctcagtgtgctgttgctgtggctggtatt
gtaatgcaggcccttgtggcgagaaatgatggtgtttggagcaaagatcacataactgct
ctacgtaaaatttgtccaatggtcagcaatgagatcagctctgagacttctgcagctgag
gtagaaggatatggtgcatcaaaacttactgttgactctgctgtgaagtacctacagctc
gcaaataagctattttctcaagctgaactctttcatttctgtgcaagcattctggaactt
gttatcccagtttacaaaagcaggagggcatatggacagctgagtaaatgtcacacgatg
cttactaatatctatgaatcaatacttgagcaggaatcaagtccaattccgttcactgat
gcaacatactacagggttgggttttacagtgaccgatttggaaagttagatagaaaggaa
tatgtatacagggaggcccgtgatgtaaggctaggtgacataatggagaaacttagtcat
atatacgagtctaggatggatggcaatcacacgttacacattattccggattccaggcag
gtaaaggcagatgaattgcagcctggtgtctgctacctgcagataactgctgttgatcca
gtcatggaagatgaagatttgggaagcagaagggagagaatcttttctctttccactggt
agtgttcgtgcacgagtctttgatcgtttcttgtttgataccccatttacgaaaaatgga
aagactcaaggtggattggaagaccagtggaagaggcgaactgttcttcagactgaaggt
tcattcccagctcttgtgaataggcttttagttacaaaatcggaatcgcttgagttttcc
ccagtagaaaatgccattgggatgattgaaactcggacagctgccttacgaaatgaactt
gaagagcctcgcagttccgaaggggatcaactcccacgtctccagagcctacagagaatt
cttcaaggcagtgttgcagttcaggttaacagcggggtactgagtgtgtgcactgcattc
ctgtctggtgagcctgcaacaaggttgcggtcgcaggaactgcagcaactcattgccgcg
ctccttgaatttatggcagtatgcaagcgtgccattcgtgtccacttcagattgattggt
gaggaagatcaggagttccacacacagcttgtgaatggatttcaatctctaactgccgag
ttgtctcattacatccctgccattctgtcagagctgtga
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