Prunus mume (Japanese apricot): 103325743
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Entry
103325743 CDS
T03196
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103325743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103325743
03110 Chaperones and folding catalysts [BR:
pmum03110
]
103325743
03029 Mitochondrial biogenesis [BR:
pmum03029
]
103325743
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmum04147
]
103325743
Enzymes [BR:
pmum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
103325743
Messenger RNA biogenesis [BR:
pmum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
103325743
Chaperones and folding catalysts [BR:
pmum03110
]
Heat shock proteins
HSP60 / Chaperonin
103325743
Mitochondrial biogenesis [BR:
pmum03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
103325743
Exosome [BR:
pmum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103325743
Exosomal proteins of other body fluids (saliva and urine)
103325743
Exosomal proteins of breast cancer cells
103325743
Exosomal proteins of colorectal cancer cells
103325743
Exosomal proteins of bladder cancer cells
103325743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
gpW
Motif
Other DBs
NCBI-GeneID:
103325743
NCBI-ProteinID:
XP_008226152
LinkDB
All DBs
Position
LG1:6869691..6873171
Genome browser
AA seq
585 aa
AA seq
DB search
MASANALTSAAILCSPSQSLRRRVNQQQNNRVNYKQSRGRFVVKAAAKDIAFDQNSRRAL
QAGIDKLADAVGLTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELPDAMENAGAALIREV
ASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVHGLIEELENKSRP
VKGRDDVKAVATISAGNDEYIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDR
GYISPQFVTNPEKLIVEFENARVLITDQKITAIKDIIPLLEKTTQLRAPLLIIAEDVSGE
ALATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQL
GLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGVA
VIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTYVPALKQKLVDAD
EQLGADIVQKALVSPAALIAQNAGIEGEVVVEKIKDSEWEVGYNAMTDKYENLVEAGVID
PAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKSPAAAAAQGLTV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggccaacgctcttacttcagctgccattctctgctcgcccagtcagagtttg
agaaggagggtgaatcagcagcaaaataatagggtgaattacaagcaatcaaggggccga
tttgttgtgaaggccgctgcaaaagatatagcttttgaccagaactcaaggcgtgcgcta
caggccggaattgataagcttgctgatgcagttggccttactcttggccctagggggagg
aatgttgtcttggacgaatatggaagtcccaaagtggtgaatgacggagtaacaattgct
agagctattgagcttcccgatgctatggaaaatgctggtgcagctctcattagggaggtt
gctagcaaaacgaacgactcagctggtgatggaacaacaacagcatcaattcttgctcgg
gagataatcaagctcggacttttgagtgtcacctctggtgcaaatcctgtttcaataaag
aaggggattgataaaactgtacatggtctgatagaggagctagagaataagtctaggcct
gttaagggtcgtgatgatgttaaagctgttgctactatttctgctgggaacgatgagtat
attgggacaatgattgctgatgctattgacaaggtgggacctgacggtgtcctatccatt
gagtcatcatcctcatttgagacaaccgtcgaagtggaagaaggaatggagattgacaga
ggatatatctcccctcaattcgttacaaaccctgagaaattgattgttgaatttgagaat
gcaagagttttgattactgaccagaaaattacagctatcaaggacataattccccttttg
gagaagaccactcagttgagagcccctctgcttataattgctgaggatgtctctggggag
gctttggcgactcttgttgtgaacaagttgaggggcataattaatgttgctgccatcaaa
gctcctggttttggtgaaaggagaaaggctctcctccaagatatcgccattttaacagga
gctgagtttcaagccagtgatctgggtctactggtggagaacacctcagttgagcagctt
ggtttggcccgaaaggtgacaatctcaaaggactccactaccataattgctgatgcagca
tcaaaagatgagttgcaagctaggattgcacagctgaagaaggagttatctgagacagat
tccgtttatgactcagaaaaattggctgagcggattgctaaattatcaggtggagttgct
gttataaaggtgggagctgctacagagaccgaacttgaggaccgtaagcttcgtattgag
gatgccaagaatgccacttttgctgccatagaggaaggtattgtgcctggtggtggtgcc
gccttggtgcatctgtcaacatatgtccctgcactcaagcaaaaacttgtagatgcagat
gagcagctaggtgccgacattgtgcagaaggcactggtatcaccagcagcattaatagct
caaaatgctggaattgaaggtgaagtggttgtggagaaaataaaggatagtgaatgggag
gttggttacaacgcaatgacagacaagtacgagaacttggtggaagccggtgttattgac
ccagcaaaggtaacaagatgtgctttacagaatgcagcttcggttgctggaatggtgttg
accactcaagccattgtggtggaaaagcctaagcccaagtcacctgcggctgctgctgca
caaggtcttactgtgtaa
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