Prunus mume (Japanese apricot): 103325840
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Entry
103325840 CDS
T03196
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103325840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103325840
03009 Ribosome biogenesis [BR:
pmum03009
]
103325840
04131 Membrane trafficking [BR:
pmum04131
]
103325840
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmum04147
]
103325840
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103325840
Ribosome biogenesis [BR:
pmum03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
103325840
Membrane trafficking [BR:
pmum04131
]
SNARE
SNARE associated proteins
Others
103325840
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103325840
Exosome [BR:
pmum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103325840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_2
AAA_22
AAA_5
AAA_14
TIP49
AAA_18
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
Parvo_NS1
IstB_IS21
Zeta_toxin
ABC_tran
Vps4_C
AAA_7
NACHT
NB-ARC
AAA_24
DUF815
Viral_helicase1
TsaE
ResIII
KAP_NTPase
UFD1
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
103325840
NCBI-ProteinID:
XP_008226257
LinkDB
All DBs
Position
LG1:complement(6977630..6982861)
Genome browser
AA seq
803 aa
AA seq
DB search
MAHPAESSDSKKKDFSTAILERKKSPNRLVVDEAINDDNSVVSMHPETMEKLQLFRGDTI
LIKGKKRKDTICIALADDTCEEPRIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHIL
PIDDSIEGVTGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVA
PDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPP
KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP
SIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDSALR
RFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERISKDTHGYVGADLAALCTEA
ALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWED
IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPELLTMWFGESEANVREIFDKARASAPCVLFFDELDSIATQRGSSSGDAGGAAD
RVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRFQIFK
SCLRKSPVSKDVDLRALARYTQGFSGADITEICQRSCKYAIRENIEKDIERERRRGENPD
SMDEDIDDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFADNP
TGATGADPFATSAGGADEDDLYS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggctcacccagccgaatcgtccgactcgaagaagaaggacttctcgaccgcgattctg
gagcggaagaagtcgccgaaccgtctcgtcgtcgatgaggctataaacgacgacaactct
gtcgtttcgatgcatccagagaccatggaaaagctccagcttttccgtggtgacactatc
ctcatcaaggggaagaaacggaaggacacaatctgcattgcacttgctgatgacacctgt
gaagagccaagaatcaggatgaacaaggttgtcagatcgaatttgagggttcgacttgga
gatgttgtgtctgtacaccaatgccctgatgtgaagtatgggaaacgtgttcacattctg
cctattgatgactccatagaaggagttactggaaatctctttgatgcctttttgaaacct
tactttttggaagcttatcgccctgtgaggaaaggagatctgttccttgtcagaggagga
atgagaagtgtagagttcaaggttattgaaacagacccaggagaatattgtgtggttgcc
ccagacactgagatcttctgtgagggggaaccagtgaaaagggaggatgaggaaaggttg
gatgaagttggttatgatgatgtgggtggtgttcggaagcagatggctcaaatccgtgaa
ttagttgagctgccactgaggcatcctcaactgtttaaatctattggtgtgaaaccacca
aaaggaattctactttatggacccccgggttcaggaaagacattaatagccagagctgtt
gccaatgaaactggtgcttttttcttttgcattaatgggccggagattatgtctaaattg
gctggagagagtgagagcaatctcagaaaggcatttgaagaagcggagaagaatgcccca
tcaatcatctttattgatgagcttgattcaattgctcctaagagggagaagacacacggt
gaggttgaaaggcggattgtttctcaacttttgactctgatggacggattgaaatctaga
gctcacgttattgttattggtgctacaaatcgtccaaacagtattgactcggctttgaga
aggtttggtaggtttgatagggagatagacattggtgttcctgatgaagttgggcgcctt
gaagttcttcgcattcacaccaagaacatgaaactctctgatgatgttgatttagagagg
atttccaaagatacacatgggtatgttggtgctgaccttgctgctctctgcactgaagct
gcactgcaatgcattagggagaagatggatgtgattgacttggaagatgaaaccattgat
gcggagatactcaactcaatggctgtaacaaatgagcacttccagactgctctaggaaca
agcaatccatctgctttgcgcgaaacggtggttgaagttcccaatgttagttgggaggat
attggaggccttgaaaatgtcaagcgggagctacaagagactgttcaatatcctgtcgag
cacccagagaagtttgagaaatttggcatgtcaccttctaaaggggtccttttctatgga
cccccaggatgtgggaaaactctcttggccaaggcaatcgcaaatgaatgtcaagctaac
ttcatcagtatcaaaggccctgaactactcaccatgtggtttggtgagagtgaagccaat
gttcgagaaatctttgacaaggctcgtgcatctgcaccatgtgtccttttctttgatgag
cttgattccattgctacgcagagaggaagcagttctggggatgcagggggtgctgctgat
cgggttcttaaccaactcctgactgaaatggatggcatgacagcaaaaaagactgttttc
attattggggccacaaaccgacctgacatcattgacccagcacttctccgacctggccgt
cttgatcaattgatttatattcctcttcctgatgaagaatcgcgtttccaaatctttaaa
tcctgcttgagaaaatcacctgtctcaaaagatgttgatttgagagcattggccaggtat
acacagggctttagtggggctgatatcacagagatctgccagcggtcctgcaagtatgcc
ataagagagaatattgagaaggatatagagcgggagagaaggagaggggagaatccagat
tctatggatgaggacatcgatgacgaagtggcagagattaaagctgctcattttgaggag
tcaatgaaatatgctcgtaggagtgtcagcgatgcagatattcgcaaatatcaggccttt
gctcagaccttgcagcagtccaggggtttcggaacggagtttaggtttgctgataaccca
actggggcaactggtgctgatccattcgcaacttctgctggtggggctgacgaagatgat
ttgtatagttag
DBGET
integrated database retrieval system
