Prunus mume (Japanese apricot): 103326004
Help
Entry
103326004 CDS
T03196
Name
(RefSeq) E3 SUMO-protein ligase MMS21 isoform X1
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103326004
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103326004
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
103326004
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
103326004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Nse
zf-C3HC4_2
UBL_UBAC1
zf-RING_UBOX
zf-MIZ
zf-RING_2
DUF5797
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
103326004
NCBI-ProteinID:
XP_008226426
LinkDB
All DBs
Position
LG3:10396489..10399398
Genome browser
AA seq
259 aa
AA seq
DB search
MASTSASRTHGATGRIRTATATLYEDNQSLISDIRRAVGAMKEIAVDLERDNQFERVKEL
ENAVIELLGTHEDCSHFSSTIQSVGEKYQPGPQLMRVYYLRSQLTDFDQLFKNEVAMLKA
NSSSDPQNHPLMRQFREAVWNVHHAGEPMPGEEQEDIVMTSNQCNILNVTCPLSGKPITE
LQHPVRSVVCKHVYDKGSIMHYLRSKNTRCPVAACPKLLQADKVVCDPLLLVEIDELRAM
KEHTVMTDVIEDFTELDEE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgacctccgcttctcgaactcatggcgccacgggccggatccgaaccgccaca
gccactctctacgaggacaaccagtctcttatctctgatattcgtagagctgtgggtgca
atgaaggaaattgcagttgatttggagagagataatcagtttgagagggtaaaggagctt
gaaaatgctgttattgaattgttgggtactcatgaagactgttcgcatttttcatccaca
attcaatctgttggagagaaataccaacctgggccacagctgatgcgagtttattatctt
cgaagccagcttactgattttgatcagttgttcaagaatgaggttgcaatgctcaaggct
aattcatcttcagatccacaaaaccatcctttgatgcgccaattccgggaagctgtctgg
aatgttcatcatgcaggagagcctatgccaggtgaagagcaggaggacattgtaatgacc
agcaaccaatgcaatattctgaatgtcacctgcccattaagtggaaagcctatcactgaa
ctgcagcatccagttcgcagtgtcgtatgcaagcatgtttatgacaaagggtcaatcatg
cattacttacgctcaaagaacacacgatgccctgttgcagcttgccctaagctattgcag
gcagataaagtggtgtgtgatccgttgttactcgtcgaaattgatgaattgcgtgcaatg
aaggaacacactgtcatgactgatgtcatagaggattttactgagcttgatgaagagtga
DBGET
integrated database retrieval system
