KEGG   Prunus mume (Japanese apricot): 103326079
Entry
103326079         CDS       T03196                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum04144  Endocytosis
pmum04145  Phagosome
pmum04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103326079
   04145 Phagosome
    103326079
   04148 Efferocytosis
    103326079
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmum04131]
    103326079
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmum04147]
    103326079
   04031 GTP-binding proteins [BR:pmum04031]
    103326079
Membrane trafficking [BR:pmum04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    103326079
Exosome [BR:pmum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103326079
  Exosomal proteins of other body fluids (saliva and urine)
   103326079
  Exosomal proteins of colorectal cancer cells
   103326079
  Exosomal proteins of bladder cancer cells
   103326079
GTP-binding proteins [BR:pmum04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    103326079
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU ATP_bind_1 RsgA_GTPase cobW nSTAND3 Septin AAA_16 AAA_7 PduV-EutP AAA_22 AAA_24 nSTAND1 NACHT MCM Sigma54_activat
Other DBs
NCBI-GeneID: 103326079
NCBI-ProteinID: XP_008226511
LinkDB
Position
LG3:10993784..10995296
AA seq 207 aa
MDISMKRRTLLKVIVLGDSGVGKTSLMNQYVYKKFHRQYKATIGADFVTKELQIDDKLVT
LQVWDTAGQERFHSLGAAFYRGSDCCVLVYDVNVSKSFETLQNWHEEFLKQADPTDPEAF
PFVLIGNKIDVDGGNSRAVSEKKAREWCASKGNIPYFETSAKEDYNVDEAFLCIAKTGMI
NEHEQDIYFQGISESVSEAEQRGSCAC
NT seq 624 nt   +upstreamnt  +downstreamnt
atggatatttctatgaaaagaagaaccctgcttaaggtcattgtccttggagatagtggg
gtgggaaagacgtctttgatgaatcaatatgtgtacaagaagttccatcgacagtataaa
gctacgatcggtgctgatttcgtcacgaaggaacttcagattgatgacaagttggtgact
ttgcaagtttgggacacagcggggcaagaaagatttcatagtcttggagctgcgttttat
aggggatccgattgctgtgttcttgtgtatgatgtgaatgtgagcaaatcatttgaaaca
cttcagaactggcatgaagagtttctcaaacaggctgatccgactgaccccgaggcattt
cccttcgtattaattggaaacaaaatcgatgtagatggtggaaacagccgagcggtttct
gagaagaaggctagagagtggtgtgcttcaaagggaaacataccctattttgagacctct
gcgaaagaggattataatgtcgacgaagcgtttctatgtattgcaaaaacaggaatgatc
aatgaacatgaacaagacatttacttccaaggtatttcagaaagtgtttcagaagcagag
caaagaggaagctgtgcatgctaa

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