Prunus mume (Japanese apricot): 103326281
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Entry
103326281 CDS
T03196
Name
(RefSeq) double-strand break repair protein MRE11
KO
K10865
double-strand break repair protein MRE11
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03440
Homologous recombination
pmum03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103326281
03450 Non-homologous end-joining
103326281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmum03032
]
103326281
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103326281
DNA replication proteins [BR:
pmum03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
103326281
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
103326281
BRCA1-C complex
103326281
NHEJ (non-homologous end-joining)
MRX complex
103326281
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
PspAA
Motif
Other DBs
NCBI-GeneID:
103326281
NCBI-ProteinID:
XP_008226714
UniProt:
A0ABM0NLV3
LinkDB
All DBs
Position
LG3:complement(12533517..12543356)
Genome browser
AA seq
724 aa
AA seq
DB search
MSDLSREDFSNTLRILVATDCHLGYMEKDEIRRHDSFQAFDEICSIAEQKNVDFVLLGGD
LFHENKPSRSTLVKAIEILRRHCMSDRPVQFQVVSDQTVNFANTFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGQITVYPILMRKGATAVA
LYGLGNIRDERLNRMFQTPHAVQWMRPESQEGLQVSDWFNILVLHQNRVKTNPKNAINEH
FLPRFLDFVVWGHEHECLVDPQEVPGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGN
QYRPTKIPLTSVRPFEYTEIVLKDEPEIDPNDQNSILEHLDKVVHSLIEKCRKNVVSQSR
LQLPLVRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASTKSRSEAKIDDSERLR
PEELNQQNIEALVAENNLKMEILPVNDLDVALHNFVSKDDKMAFYSCLKYNLEETRNKIS
KDPDTVTFKEQDLVLKVGECLQERVKERSTHSKNNSPFTSTAPSWEDFRSTSAAGTASAV
SFSDDEDTTQMTGLKSTSRGRKGPSKPSSSEVGKGKTSTRGRGRGRGRGSSNLKQTTLDA
SLGFRQSQRSASVAATAAVRSIADNGDDVDSPSSEESGKFGNDEVDNSSENDESLQSRGR
KRAAPRGRGRGSTQPSKRGKKSDNSAINRMFMNKDDEDDDEEDLTKRFNKPLPRVTRNYG
NLRR
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacttatcaagggaggattttagtaatacgcttcgaatacttgttgctacggat
tgccatctgggctatatggagaaggatgaaatacggcggcatgattctttccaggcattt
gatgagatatgctcaatagcagaacaaaagaatgtggattttgtgcttctcggtggtgat
ttgttccatgagaataagccctcaaggtcaactctagttaaggccattgagattcttcgc
cgtcattgcatgagtgatcggccagtgcagttccaagttgttagcgaccagactgtgaat
tttgcaaatacatttggccatgtaaattatgaagatcctcacttcaatgttggcttgcca
gtgtttagtattcatggaaatcatgacgatcctgctggagtggataatctctccgctgtt
gatattctctcagcctgcaatcttgtaaactattttgggaaaatggttcttgggggttct
ggtgttggtcagatcactgtgtatcctatccttatgaggaagggtgcaacagctgtggct
ctctatggtcttgggaacatcagagatgagagactcaatagaatgtttcagacaccacat
gctgtacaatggatgagacctgaatctcaagaagggttgcaagtgtcagactggttcaac
attctggtgcttcatcagaacagagtgaagacaaacccaaaaaatgccataaatgagcac
tttttaccacgttttctggactttgtggtgtgggggcacgaacatgaatgccttgtggac
cctcaggaagttccagggatgggatttcacattacacaacctggttcttcagttgcaaca
tctctgattgatggagaatcaaagccaaagcatgtgctacttttagaaattaaggggaat
caatatcgtccaaccaagattcctttgacgtcagtgaggccttttgagtacacagagatt
gtattgaaggacgaacctgaaattgatcccaatgatcaaaattcaattcttgaacactta
gacaaagtggtccactctctgatagagaaatgtagaaaaaatgttgttagccaatcacgg
ctccaacttccattagtccgcataaaggtagactattctgggtttatgacaataaatcct
caaagatttggacagaagtatgtggggaaggttgcaaacccacaagacattcttatattt
tcaaaggcttcaacaaagagccggagtgaagccaaaattgatgattctgaacggcttcgc
ccagaagaattaaatcagcaaaacatagaggctttagttgccgaaaacaatctgaaaatg
gagatccttcctgtcaatgatttggatgttgcattacataattttgttagtaaggatgac
aagatggctttctattcttgcctgaaatacaatcttgaagaaactcgaaacaaaatttct
aaggatccagacactgtgacatttaaagagcaagatttggtcctaaaagttggagagtgc
ttgcaggaacgtgtcaaggaaaggtctactcactctaagaataattctccattcacctca
actgctccatcttgggaggatttcagaagtacaagtgctgcaggaactgcaagtgcagtt
tccttcagtgatgatgaagatacaacacagatgacgggcttaaaatccacttccaggggc
cgcaagggcccatccaagccgtcttcttcagaagttggcaaaggtaaaacttctacaaga
ggaaggggaaggggtaggggtaggggctccagtaacttgaagcagacgactctcgatgca
tctcttggattccggcagtctcagagatctgcatcagttgctgcaactgctgctgtccga
agtattgccgataatggggatgatgtggattctccttcaagtgaagagtcagggaaattt
ggaaatgatgaggtggataacagttcggaaaatgatgaaagtcttcagagtagaggacgg
aaaagggctgctccaagggggagaggtagaggctctacacaaccctctaagcgtggaaag
aaatccgataactctgcaattaaccgaatgtttatgaacaaagatgatgaagatgacgat
gaagaggatctgacgaagagatttaataaacctctgcctcgggtcacaagaaactatggc
aatctaagaaggtaa
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