Prunus mume (Japanese apricot): 103326393
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Entry
103326393 CDS
T03196
Name
(RefSeq) DNA polymerase I A, chloroplastic/mitochondrial
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03030
DNA replication
pmum03410
Base excision repair
pmum03420
Nucleotide excision repair
pmum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103326393
03410 Base excision repair
103326393
03420 Nucleotide excision repair
103326393
03440 Homologous recombination
103326393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmum03032
]
103326393
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103326393
Enzymes [BR:
pmum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103326393
DNA replication proteins [BR:
pmum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
103326393
DNA repair and recombination proteins [BR:
pmum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
103326393
NER (nucleotide excision repair)
GGR (global genome repair) factors
103326393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
103326393
NCBI-ProteinID:
XP_016648253
UniProt:
A0ABM1LLH6
LinkDB
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Position
LG3:13284089..13293226
Genome browser
AA seq
1012 aa
AA seq
DB search
MAMGFSSIQTSHLRPSCPSYFSVFRSCPRSSSSRSLWTRTRPEVCAAKAAHDTFSNNTMI
SLNPVHYHTERESNGTKSAWNNKVFAMREEKKVMENYFGRNVSRAGGIKTNSQERLEGFT
HVSTCDKLEENSEGSYCKIIDYGQLDKTPGEGNHVDKVNSEGNHVDKVNGEGNHVDKVNG
YAHDGLVVSTSSRIENINLEKVNGHAREGPRQLGVVNGSQLGKTSKVRKGTDSGRNKDEA
AAVIKGDKSHAKASAIKAATKADNDCKQDLRIRLNTIYDKVLVVNSVSVAKKVVKMLTDQ
YRNLVHACDTEVAKIEVKRETPVDHGEIICFSIYSGPGVDFGNGKSCIWVDVLDGGGKEL
LIEFAPFFEDRSIKKVWHNYSFDNHVIENYGLKLSGFHADTMHMARLWDSSRRIKGGYSL
EALTRDPKVMSGAKQCHLKDLVGKISMKTIFGRKKVKTDGKEGKLTIIDPVEVLQREERK
LWICYSALDAISTLNLYESMKNQLGKKLWEIDGNPISGKSMFDFYEKYWRPFGELLVQME
TEGMLVDREHLAEIEKQAKAEQVVAANRFRRWASSYCPDAKYMNVGSDVQLRQLLFGGTM
NSKDSDQAVPTERTFRVPNIDKVIEDGKDTTPKYRNVTLHGIGVNLPAEIYTASGWPSVG
GDALKILSGKVSSEFHFMDDDIDDVGDACETVSDEYLVKQENMSEYVDTSAYGTAFEAFK
PKEKGKEACHAIAALCQVCSIDSLISNFILPLQSSNISGKNRRIHCSLNINTETGRLSAR
RPNLQNQPALEKDRYKIRQAFVAAPGNSLIVADYGQLELRILAHLSNCKSMLDAFKAGGD
FHSRTAMNMYQHIWEAVEKKEVLLEWDPQPGEDKPPVPLLKVKKCKEEATKHGHVRTLLG
RERRFPSIARASRAQRGHIERAAINTPVQGSAADVAMCAMLEIFNNAHLNDLGWRLLLQV
HDEVILEGPSESAEVAKAIVVECMSKPFNGKNFLKVDLAVDAKCAQNWYSAK
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggctatggggttctcctcaatccaaaccagccatttaagaccttcttgcccttcttat
ttctctgtattccgttcctgcccccgctcttcttcgtccaggtctctatggactcgtacc
aggccagaggtctgtgcagccaaagctgctcatgatactttttcaaataatacgatgatc
tctttgaatccagttcactatcatactgaaagagaatctaatggcactaaaagtgcctgg
aacaacaaggtttttgcaatgagagaagaaaaaaaggtaatggaaaattattttggaagg
aacgtctcccgtgcaggaggtattaaaacgaatagccaagaaaggcttgagggtttcaca
catgtcagtacgtgtgataagttggaagaaaattcagaaggctcatattgcaaaataatt
gattatggacaattggataaaacacctggtgaaggaaatcatgtggacaaggtaaatagt
gaaggaaatcatgtggacaaggtaaatggtgaaggaaatcatgtggacaaggtaaatggt
tatgcacatgatggtctggttgtgtcaacttccagtaggattgaaaatattaatctggag
aaggtcaatggtcatgcacgtgagggtccaagacaattgggtgtggttaatgggtcacaa
ttagggaagacctcaaaggtaaggaaggggactgattctggacgaaataaagatgaagct
gcagctgtgattaaaggggacaagtctcatgcaaaagcttctgcaattaaagctgctaca
aaagcagataatgattgcaagcaagatcttcgtattaggcttaataccatatatgacaag
gttcttgttgtcaatagtgtctctgttgcaaagaaagttgtgaagatgcttacagatcaa
tacaggaatcttgtccatgcctgtgacacagaggtggctaagatagaagtgaagcgagaa
acacctgttgatcatggagaaataatatgtttcagtatttattctggaccaggtgtggat
tttggaaatgggaagtcttgtatttgggtggatgttcttgatggcggcggcaaggaactt
ttaattgaatttgctcctttttttgaagatcgctccatcaaaaaggtttggcacaattac
agctttgataaccatgtaatagagaactatgggcttaagctttctggttttcacgccgac
acaatgcacatggcgcgcttgtgggattcatcaaggcggataaagggaggctattctctt
gaagcacttacacgtgaccctaaggtcatgtctggggcaaaacagtgtcatttgaaggat
ttggttggtaaaatatcaatgaaaacaatatttggcaggaagaaagtgaaaacagatgga
aaagaagggaaattgaccattattgatcctgttgaagtgctacaaagagaagagagaaaa
ctatggatttgctattctgccttagatgcaataagcacactaaatctgtatgagagcatg
aaaaaccaactaggcaaaaagctgtgggaaatcgatggaaaccccatttctggaaaatcc
atgtttgatttctatgaaaaatactggcgaccgtttggtgagcttttagttcagatggaa
actgagggaatgttggttgatcgagaacatttagctgagattgagaagcaggccaaagcc
gaacaagtggttgctgcgaacaggtttcgcaggtgggcttctagttactgccctgatgcc
aagtacatgaatgtgggaagtgatgtgcaactacgccagctcttgtttggtgggaccatg
aacagcaaggactccgatcaggctgttccaactgagaggacttttagagttccaaacatt
gataaagtgattgaagatggaaaggatacaaccccaaaatatcgcaatgtcactctgcat
ggtattggtgtcaatcttccggctgagatttacacagcaagtggttggccctcagtcgga
ggagatgctttgaagattttatctgggaaggtctcttcagaatttcattttatggatgat
gacatagatgatgttggagatgcttgtgaaacagtgagtgatgaatacttggtaaaacaa
gaaaatatgtctgaatatgttgacacatctgcttatgggacggcttttgaagcatttaaa
ccaaaggagaagggaaaggaagcttgccacgctattgctgctttgtgtcaagtttgctct
atcgattcgttgatatccaacttcatcctccctttgcagagcagtaatatatcgggcaag
aacaggcggattcattgttccctaaatatcaacacggaaacggggcgtttatctgctagg
aggcctaatttgcagaatcaacctgctttggagaaagaccggtataagatccgtcaggcg
tttgtagctgcacctggaaattctcttattgttgctgactatggacagctggaactcagg
attcttgctcatctttccaactgtaagagcatgttggatgccttcaaagctggtggagat
tttcattcaaggactgcaatgaacatgtatcagcatatttgggaagccgttgagaaaaag
gaagtgctacttgagtgggatcctcaacctggtgaagataaacccccagttccactattg
aaggttaaaaagtgcaaagaggaagctacaaagcatggacatgttcgcacattgctagga
cgggaacgcaggttcccctcaatagctcgtgctagtcgcgctcaaagaggtcatatcgaa
agggctgctataaacacaccagtgcagggtagtgctgctgatgttgccatgtgtgccatg
ttagaaatattcaataatgcgcatttgaatgatcttgggtggaggctgcttttacaggtt
catgatgaagtgatcttggaagggccatctgagtctgctgaggttgcaaaggcaatagtt
gttgagtgcatgtcgaagcccttcaatggcaagaatttccttaaggttgaccttgctgtt
gatgccaaatgtgcacaaaactggtattctgccaagtag
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