Prunus mume (Japanese apricot): 103326417
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Entry
103326417 CDS
T03196
Name
(RefSeq) UPF0505 protein C16orf62 isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103326417
Membrane trafficking [BR:
pmum04131
]
Protein recycling
Others
Retriever complex
103326417
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Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
103326417
NCBI-ProteinID:
XP_008226852
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Position
LG3:13610807..13624515
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AA seq
917 aa
AA seq
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MEFRPRNYSAEKQAHALPRVRADDHPLSAPSSLPHLQVEVVEHGNMEFFDPLRRSDNNAK
AAREDLVDIETSSGAGLSSEASIQNPSKEWASFKRSLVQRFPVSKTVSTSSMSDVMVKGR
KTYEKSSTSMHLEELDDPEKFAEEGGKVITGQEYVSRLHELKAELTRAWHADDRVTSLKI
SIKVARLLMDTSILQCYPTLFALATDILDMLGDMVWERIKLKAEFDEDETKFCFLPENFS
ASDVCSDAKETCKNWFCKIGAVRELLPRIYLELALLPCWRFLVDQPLDSLRRLVMMTRGL
ADPLASAYCRLYMSHCMRKLPSHDTGCLLTCANDFKIVLMRVISAEETSHGNLSDNKRLL
VGLMEPTIEFIMKCIFKNMSERQVGDVLVELGLGDNQVELFGRFPYVSIVLHHLLKQLPS
EVVSSRAVEILRLIELSNDDSFDQCLNYRLLGFRLCERSQIDTANAVVDKAIQVIVHYDG
LDEYLKVADAYVDIILQNHMDDHLNSILEGISKRACSEEIADDEMANLQSILVKLLSYYK
DLEDIFSMNHFLKILDLMYGSSRSIVNMHILDIGIRNGCIRDPRTIQFLLEISQALHQDE
NFGNLKDDTNQPARLISQFVSLVDYGVEMESQLAFLVECRGSFGGIRGLKETLIHSSNCL
AIKALKDGNRHLGFVKSCIAFSEVTLPSISPQIRQLNLYLETAEVALLGGLISHSDGLID
SAINSLQILDVLDGSRTPIDADGVLSSIQKLFSLLVMVPGNLEHGVTYLPKNLVLLINSQ
SWMTPRMRVKFFCAIVSLLAALSQQNLPYHADNGKLLGNDVLFFGDSSYQHELASLCQFV
LQNLVDAIQQEPSMTARGSMALEACNCIASSLILSQEISSICSKLIETGKSCLSTNNRHL
QSTIQFIDHLPHSSVAV
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggagttcagacctcgcaattacagtgccgaaaagcaagcccacgcgcttccgcgagta
agagcggacgatcaccctctctccgctccatcgtctctacctcacctccaggttgaggtc
gtggaacatgggaatatggagttttttgacccgctaagaaggtccgataacaatgccaaa
gctgctagagaggatttagtagacattgaaaccagttctggggcagggctctccagtgaa
gcttctattcaaaatccatctaaagaatgggcctcttttaagagatccctggtgcagagg
tttccagtctccaaaacagtttcaacttcttcaatgtccgatgtgatggtgaaaggcagg
aaaacatatgagaaatcttcaacaagtatgcatttggaggaactggacgatccggaaaaa
tttgcagaagagggtggcaaggtcatcacagggcaggaatatgtttctcgattgcatgaa
cttaaagctgaattaactcgtgcatggcatgctgatgatcgtgtgacatccttgaaaata
tcaataaaagtcgctaggcttttgatggatacatctattttacaatgctatcctacactc
tttgctcttgctacggatattttggatatgcttggggatatggtatgggaacgcatcaaa
ttgaaagctgaatttgatgaagatgaaaccaaattctgcttcttaccagagaacttttca
gcaagtgatgtttgctctgatgccaaagaaacttgcaagaactggttctgcaaaattggt
gctgtccgagagcttcttccacgcatttatttggagctggcattattgccttgctggcgt
ttcttggttgaccaacctcttgacagtctccggcgcttggtaatgatgacgagaggctta
gcagatccattggcatctgcctattgccgtctgtatatgtcccattgtatgaggaagttg
ccttcacatgatacaggatgcctgctcacttgtgcaaatgacttcaaaattgtgttgatg
cgggtcatatcagcagaggaaaccagtcatggaaatttgagtgacaacaaaagattgctt
gtcggtctgatggaacccaccattgagtttatcatgaaatgcatatttaagaacatgtcc
gagagacaagtaggtgatgtgctcgttgagcttggacttggggacaaccaagtggagttg
tttggaaggttcccatatgtctcaattgttcttcatcatctactcaagcaacttccatcg
gaagtagttagctcaagggctgtggagatccttcgtctcattgagttaagcaatgatgat
tcctttgatcagtgcttgaattacaggttacttggatttaggctgtgtgaaagatctcaa
attgacactgccaatgctgtggtggacaaagccatccaggttattgttcattatgatggc
cttgatgagtacttgaaggttgcggatgcttatgtggatattatccttcaaaatcatatg
gatgaccatctgaactccattttagaaggtatttcaaaacgagcatgcagtgaagagatt
gctgatgatgaaatggcaaacttgcagtccatcttggtgaagcttctttcttattacaag
gatttagaagacatattttccatgaatcattttctcaagatcttggatctaatgtatgga
agttcacgaagcatcgtcaatatgcatatccttgatatagggataaggaatggttgtata
cgtgatccacgaaccatacagtttcttcttgaaatttctcaggctctacatcaggacgaa
aattttgggaatctaaaagatgatactaaccaaccagcacgtttgatttctcagtttgta
tctctggttgattatggggtagagatggagagtcagttggcattcttagttgaatgtcgt
ggatcttttggtggcattcgtgggcttaaggaaactcttattcactccagtaattgttta
gcgattaaggctttgaaagatgggaataggcatcttggttttgtaaaatcctgcatagca
ttttctgaagtcacattaccttctatttcaccccagattagacagttaaatctttatctt
gagactgcagaggtagctctactgggtggcttaatttcccattcggatggactgattgat
tcagcaatcaactctttgcaaattttagatgtactggatggctccagaacaccaattgat
gctgacggagtactctcctcaattcaaaaattatttagtctcttggttatggttccaggt
aatcttgagcatggagttacgtacttaccaaagaacttggtgttgctgatcaactcacag
tcatggatgactccaagaatgagggtgaaatttttttgtgcaattgtttcgctgttagcg
gcactatctcaacaaaatcttccttatcatgcagataatggaaagcttctaggaaatgac
gtattgttctttggtgattcatcatatcagcatgagcttgcctcattgtgccagtttgtt
cttcaaaacctggttgatgctattcaacaagaaccttccatgactgctcgtgggagcatg
gcgcttgaagcttgcaactgcattgcatcatctttgattctaagtcaggaaatatcttca
atttgctccaaactgatagagactgggaagtcatgtttgagcacaaacaatagacatctg
caatcgacaattcaatttattgatcacttgccccattcatctgttgctgtctga
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