Prunus mume (Japanese apricot): 103326434
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Entry
103326434 CDS
T03196
Name
(RefSeq) protein argonaute 5
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103326434
03036 Chromosome and associated proteins [BR:
pmum03036
]
103326434
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103326434
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103326434
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
103326434
microRNA pathway
RISC loading complex
103326434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
103326434
NCBI-ProteinID:
XP_008226878
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Position
LG1:7801128..7807992
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AA seq
1000 aa
AA seq
DB search
MSQRGRGRGRHYDQSSGSDAPSFHRGGGGGRRGRGRDGGAPPSFPSESGPSQRGRGRAGG
SGVVAPPPVQAYAPPPPSQPLAAQPPAQAYAPPPPATVQASSSSAPPSAEAPLIAEMEQK
LTLTTPPPSSSKAIRVPARPGFGTFGTRIQVRANHFLVEVKERDLHHYDVSITPEVTSKK
TNRDVIKQLVHLYKDSHLGKRIPAYDGMKSIYTAGQLPFVSKEFVVKLGERDGRDGSSGS
KRKDREFKVAVKLANKPDLHQLQQFLKSRQHESPQEAIQVLDVVLRAAPSDKYTVIGRSF
FATELGPKGELGDGLEYWRGFYQSLRPTQFGLSLNIDVSARSFYEPILVTEFVKKHFNYR
DLSRPLLDRDRLKVKKALKGVKVALAYRDNRSYRITGVSTEPLSQLTFTLEDNRTRTSVV
QYYREKYNIVLRNVAMPALQAGSDSKPVYLPMELCSIVAGQRYSRKLNERQVTALLRATC
QRPHERERNIKQMVKQSNFNGDQLIKDEFGMQVREDMALVDARVLPPPLLKYHDQGRETK
ETPRMGQWNMINKKMVNGGKVDFWAFVNFSGLREDFNFRFCEDLVNMCDSKGVDFHAQPL
LPIESANPRQIEKVLKDIHRKSTQRLEEIGHKGKHLQLLIIILPDATGSYGMVKRICETE
LGIVSQCCQPRAASKLSKQYLENLALKINVKVGGRNTVLNDAIYRRIPLVTDIPTIIIGA
DVTHPQPGEDSSPSIAAVVASMDWPEVSKYRGIVSAQAHREEIIQDLYSLYQDPQKGSVH
GGMIREHFRAFRRSTGRKPERIIFYRDGVSEGQFSQVLLYEMDAIRRACASLEEGYLPPV
TFVVVQKRHHTRLFPADHNRRDQMDRSGNIQPGTVVDTKICHPTEFDFFLNSHAGIQGTS
RPAHYHVLFDENRFTADQLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGE
YSDVASTTAGSTSGSGGGGSVLIRALPQIKENVKDVMFYC
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaacgtggccgaggccgaggccgccattacgaccagtcttctggctccgacgcc
ccgtcgtttcatcgcggcggaggtggcggaagacgcggtagaggacgagacggcggtgct
ccaccgtcgtttccgtccgaatcgggtcccagccagcgcggccgaggtagagccggcggt
tctggcgtcgtcgctcctccgccggttcaagcttacgctcctccaccgccgtctcaacct
ctcgctgctcaaccgccagctcaagcttacgctcctcctccgccggctacggttcaggct
tcgtccagttctgctcctccgtctgcggaggctccgctgatagctgagatggagcagaag
ctaacattgacgacacctccaccgtcgtcgtccaaggccattagagttccggcaaggcca
ggatttgggacgtttgggacccggattcaagtgagggctaaccacttcttggtggaggtt
aaggagagagatctccatcactacgatgtgtcaattacccctgaagttacttcaaaaaag
accaacagagatgtgattaaacagcttgttcatctgtacaaagactcacatttgggaaag
agaatcccagcttatgatggtatgaaaagcatttacacagcagggcaattgccatttgtc
tctaaagagtttgtggtcaagttgggtgagagagatggtcgtgatgggtcttctggttcc
aaaagaaaggacagggagtttaaggtggctgtaaaattggccaacaaacccgaccttcat
cagttacaacagttcttaaagagtaggcaacatgagtcgcctcaagaagccatacaagtt
cttgatgttgttcttagggccgcaccatctgacaagtacactgtcattgggaggtctttc
tttgccactgagcttgggccgaaaggagaacttggggatggtctcgaatattggagagga
ttttaccagagtttaaggccaacacagtttgggctttccctgaatatagatgtatcggcc
agatctttttatgaacccattctggtgactgaatttgttaaaaaacattttaactacagg
gatctgtccaggcctttgcttgatcgtgatcgtttgaaggtgaaaaaggccttgaagggg
gttaaggttgcacttgcttacagggataataggagttataggatcactggagtgtccaca
gaaccactgagccaattaacgtttactttagaagataacagaaccagaacttcagtagtt
caatattatcgtgagaaatacaatattgtactaagaaatgtggctatgcctgctttacaa
gctgggagcgattcaaaacctgtttatttacctatggagctttgttcaatcgttgctggg
caacgatactcgaggaagctcaatgaaagacaagtcacagccttactacgagcgacttgt
caacgtcctcatgagcgggagaggaacataaagcagatggttaagcaaagtaattttaat
ggagatcagctgatcaaagatgaatttgggatgcaagtaagagaagatatggctctagtt
gatgctcgagttttgcctcctccattgctaaaataccatgaccaaggtcgtgaaacgaag
gaaactccacggatggggcaatggaacatgattaataagaaaatggtaaatggtggaaaa
gtggatttctgggcgtttgtcaatttctcaggattgagagaagattttaacttccgattc
tgtgaggatttggtgaatatgtgcgatagcaagggcgtggatttccatgcccaaccttta
cttcccatagaatcagccaatcctaggcagattgagaaggtgctcaaagatattcatagg
aagtctactcagagacttgaagaaattggtcataaggggaagcatcttcagttgttgatt
atcattttgcctgatgccactgggtcttatgggatggtcaagcgaatatgtgaaactgag
cttggaattgtgtctcagtgctgtcagcctagggcagcatccaagcttagtaaacaatat
cttgaaaatttagcccttaagatcaatgtgaaggttggtggaagaaatactgttctaaat
gatgccatttaccggaggattcctctggttactgatatccccacaattatcattggtgcg
gatgttactcatccacagcctggggaggacagtagcccgtcaattgcagcggtcgtggct
tccatggattggccagaggtcagtaagtaccgaggaattgtttctgcacaggctcaccgt
gaggaaataatccaagatctgtatagtttatatcaggatcctcagaagggttcagttcat
ggaggaatgatcagggagcatttcagagcatttcgaagatcaaccggccgaaaaccagag
agaattatcttctacagagatggagttagtgaaggtcagtttagtcaagttctgctctat
gaaatggatgctataagaagggcttgtgcttccttggaggagggatatctgccaccagtt
acttttgtagtggtgcagaaaaggcatcatactcgcctgttccctgctgatcataacaga
cgtgatcaaatggataggagtggcaatattcaaccaggcactgttgttgacaccaagatt
tgccaccctacagagtttgatttttttctcaacagtcatgctggaattcagggtactagc
aggccagcgcactaccatgtgctgtttgacgagaacaggttcactgctgatcagttgcaa
agtctaacgaataatttatgctacacgtatgcaaggtgtacccgctcggtttcaatagtt
ccgcctgcttattatgctcatcttgctgcattccgagcacgatattacattgagggagaa
tattccgatgtagcctctacaacagcaggttcaacaagtgggagcggaggtggcggcagc
gtgctgattcgagcccttcctcagataaaggaaaatgttaaggatgtgatgttttattgc
tga
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