Prunus mume (Japanese apricot): 103326790
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Entry
103326790 CDS
T03196
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Module
pmum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103326790
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103326790
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
103326790
NCBI-ProteinID:
XP_008227252
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Position
LG3:17375726..17377519
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AA seq
392 aa
AA seq
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MANPRSLIVLSLAFVFMINSALATAVTYNVASLGAKADGKTDSTKAFLSAWAKACASVKP
VVIYVPAGRFLLRNVVFRGPCKNNAITFRIAGTLVAPSNYGVIGNAGNWIFFQQVTGVTI
SGGILDGQGTALWACKASGKSCPSGATTLGFSNSNNIKVSGLISLNSQMFHIVVNGCHNV
KMDGVRVSASGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIENVACGPG
HGISIGSLGKDQQEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHAVMINV
QNPIVIDQNYCPEKKGCPGQVSGVRISDVTYQDIHGSSATEVAVKFDCSSKYPCSKIRLE
NVKLTYKNQVAVATCSHAGGTAAGMVQPTSCL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccctcgaagcctaattgttctctcactagcctttgtgttcatgatcaactca
gccttggccactgcggtcacatacaatgtggccagcttaggagccaaagcagatggcaag
actgactccaccaaagccttcctctccgcatgggccaaagcttgtgcctctgtgaagccc
gttgtcatttacgttccggcagggaggttcttgcttcgcaatgtggtattcagagggcca
tgcaagaacaacgccatcaccttccgcattgctggaaccctcgtggccccgtccaattac
ggggtcattggaaatgccggtaactggattttctttcaacaagttaccggggttacaata
tcgggtggaattcttgacggccaaggcaccgcattgtgggcttgcaaggcgtcgggcaag
agttgtcccagcggagcaacgacattgggtttttccaactccaacaacattaaggtgagt
ggcttaatatccctaaacagccaaatgttccacatagtcgtcaacggctgccacaatgtg
aaaatggatggtgttagggtttcggcgtccggcaatagccccaacaccgatgggattcac
gttcaaatgtcatccggtgttaccatcctcaactccaagattgcaactggtgatgattgt
gtctcaattggccccggaacctcaaatttgtggatcgaaaatgttgcatgtggacccggt
catggaataagcattgggagtctaggcaaggatcaacaagaggccggtgtgcaaaatgta
acagttaaaacggttacttttactggtacccaaaacggtttaaggatcaagtcttggggg
aggccgagcactgggtttgctaggaacattctttttcaacatgccgtaatgatcaacgtc
caaaatcccattgttatcgaccaaaactattgtcctgaaaaaaaagggtgtcctggtcag
gtttctggagttcgaattagcgatgtgacataccaagacatccacggttcgtcggcaaca
gaagttgcagttaaatttgattgtagttccaagtacccttgcagcaagatcagattggag
aatgtgaaacttacttataagaaccaagttgctgtagctacatgtagccatgcaggtgga
acagctgcgggtatggttcaacctacaagttgtttgtag
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