Prunus mume (Japanese apricot): 103326813
Help
Entry
103326813 CDS
T03196
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103326813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103326813
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103326813
mRNA cycle factors
Common to processing body (P body) and stress granule
103326813
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
103326813
NCBI-ProteinID:
XP_008227279
UniProt:
A0ABM0NN62
LinkDB
All DBs
Position
LG3:18085572..18093189
Genome browser
AA seq
1012 aa
AA seq
DB search
MITHMDKMSAPSSRERAQRLYDKVVELENRRRRSAQARIPSDPNAWQQIRENYEAIILED
HAFSEQHNIEYALWQLHYKRIEELRAHFSAATASASSNSSQAVKGPARPDRITKIRLQFK
TFLSEATGFYHDLIVKIRAKYGLPLGYFSEDSENKIVMDKDGKKSTEMKKGLISCHRCLI
YLGDLARYKGLYGEGDSKTREYAAASSYYLQAASLWPSSGNPHHQLAILASYSGDELVAV
YRYFRSLAVDSPFSTARDNLIVAFEKNRQSYSQLPGNTNASAVKELPARLTGKGRGKAEA
IPASKDNNTEVSLVKEKASSTQETYKAFCILFVRLNGILFTRTSLETFVEVLSVVSSGLC
ELLSSGAKELQNFGADSVENGLFIVRLVSILIFTVHNVKKESEGQTYAEIVQRAVVLQNA
FTAVFELMGHILERCVQLCDPSSSFLLPGILVFVEWLACCPDVAAGSDADEKQTKVRSKF
WMVCISFLNCISSTGPVSIDDDEDETCFNNMSRYEEGETENRLALWEDFELRGFIPLLPA
QTILDFSRKHSFGSDGHKEKGARVKRIVAAGKALANVIKVDQKAVYFDSKAKKFVIGFEP
PVQNDFVPTSYMGMATENDNLQENQAENTMKLGVAYPKPELTTEGDEEDEVIVFKPIVAE
KRPDVINTTWAEYEGLVPGKNASPGDLKVNGTYVTAPFDNLRHQTAFSAGSQIPVSVGNG
IPQHLQSIQSHASKLSMEAGFGASSQLPVSVSNSIPQNLQPPQSHALKLSTEEEMSLAHS
LKSMGFMGNGYVLASEPVAVSVPFQQPVNGSTSGMVYSHTKAPEAMLPFKVDAISSSGAI
ADGLTVKTSSNLPTGIRKNPVSRPVRHLGPPPGFSPVPPKNVNESIYGSDSMSENLLMDD
YSWLDGYQMPSSTKGNGFNSSINISSHSNPNRFINGNGLNGPVNFPFPGKQGPPMQLQGE
KQKSWQDFQMLDELKLHHEMQLQQQLVNGNQHLTPQPEQYQGQSAWTGRYFV
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgattacacatatggataaaatgtcagctccttcatcaagggagcgtgcccaacgcctc
tatgacaaggttgttgaattggagaataggcgtcggaggtctgctcaagctcgaattccc
tcagatcccaatgcctggcaacagatacgtgagaattatgaagcaataattctcgaggat
catgctttttctgagcagcacaatattgagtatgctttgtggcagctgcattacaagcgt
attgaggaattgagagcacactttagtgctgctacggcttctgcaagttcaaactcatct
caggctgtgaagggccctgctcggcctgatcggattacaaaaataagattgcagtttaaa
acattcctttcagaggcaactggattttatcatgatttgatagtgaagatcagagcaaag
tatgggctccctctcgggtatttctctgaggattcggaaaataaaattgttatggacaag
gatggaaagaaatctactgaaatgaagaaaggcctgatatcatgccaccgatgtttgatc
tacttgggtgatcttgcacgctacaaaggattatatggggagggggactccaaaactcgt
gagtatgctgcagcctcaagttactacttgcaagctgcatctctctggccatcaagtggg
aatccccatcatcagcttgctattttggcatcctattcgggggatgagttggtggctgtt
tatcgatattttcgtagcctggcggtggatagtcccttttcaactgcaagggataacttg
attgttgcatttgagaagaatcgtcagagttactctcagctgccggggaatactaatgct
tctgcagtcaaagagttgcctgcacgattgacaggcaaaggtagagggaaagcggaagca
atacctgcatctaaagataacaatacagaagtgagccttgttaaggaaaaagcatccagt
actcaggaaacttataaggctttttgcatactgtttgtccgtctaaatggaattcttttc
acacgtactagcctggagacatttgtagaagttctctctgtggtaagcagtggtttatgt
gagctcctgtcttctggagcaaaggagttgcagaatttcggtgcagattctgttgagaat
ggacttttcattgttagacttgtctccatattgatattcacagttcacaatgtgaagaag
gaaagtgaaggtcagacatatgctgaaattgtacaacgtgctgtcgtactgcagaatgca
tttactgctgtctttgagttgatggggcacatcttagagagatgcgtccagttgtgtgat
ccttcttcaagtttcctgttaccgggcattctggtgtttgtagaatggttagcatgttgc
ccggatgttgcagctggaagtgatgcagatgaaaaacagactaaagttagatcaaagttc
tggatggtttgcatctccttcctgaattgtatctcgtcaacagggccggtgtccatagat
gatgatgaagatgagacttgctttaataatatgagcagatatgaagaaggggaaactgag
aaccgtcttgctttgtgggaggattttgagttgagaggattcattccacttcttccagcg
caaactatattggatttctcaaggaagcattcttttggaagtgacggccacaaggaaaaa
ggggcccgtgttaaacggattgtggcggcaggcaaggctcttgcaaatgtgattaaggtt
gaccagaaggcagtatattttgattcaaaggcaaagaaatttgtcattggttttgagcct
ccagtgcaaaatgattttgttcctacctcctatatgggcatggctactgaaaatgataat
ctgcaagaaaatcaagcagagaatacaatgaagttgggagttgcatatccaaagcctgag
ttaaccacggaaggggatgaggaagatgaagtaatagtttttaagccaatagtggctgag
aagcggcctgatgtgataaacactacttgggcagaatatgagggcctggtgcctggtaaa
aatgcttctccaggtgatcttaaagttaatggcacttatgtcactgccccttttgataat
cttcgccatcaaaccgcttttagtgctggttcacaaatacctgtatctgttggtaatggt
ataccccaacatttgcaatcaattcagtcacatgcttccaagctgtcaatggaagctggt
tttggtgctagttcacaactacctgtatcagtttctaatagtatcccccagaatttgcaa
ccacctcaatcacatgctttgaagttgtcaacagaggaagaaatgtctcttgctcacagc
ttaaagagtatgggatttatggggaatgggtatgtacttgcatctgagcctgtggcagtt
tcagttccattccagcagccagtgaatggtagtactagtggtatggtctacagccacaca
aaagctccagaagctatgttgccgtttaaggttgatgctatatcatcttctggagcaatt
gctgatggtttgactgtaaagacatcatctaacctgcccacaggtatccgaaagaatcca
gtaagtcgacctgttaggcatcttggtccaccacctggttttagccctgttcctcctaaa
aatgtgaatgaatcgatttatggctccgactcaatgagtgagaatctactgatggacgat
tacagctggttggatggatatcagatgccatcttcaactaaaggaaatgggttcaatagc
tccattaatatctcatctcattcaaatcccaatcgcttcattaacggcaatggcttgaat
gggccagtgaactttccctttcctggtaaacagggtccacctatgcaactccaaggcgaa
aaacagaaaagctggcaagattttcagatgctcgatgagctcaaactacaccatgaaatg
cagctgcagcaacaacttgtaaatggaaatcagcacttgactcctcagcctgagcaatat
caaggacagtctgcctggacaggccgttattttgtgtga
DBGET
integrated database retrieval system
