KEGG   Prunus mume (Japanese apricot): 103326838
Entry
103326838         CDS       T03196                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03020  RNA polymerase
pmum03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103326838
  09124 Replication and repair
   03420 Nucleotide excision repair
    103326838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmum03021]
    103326838
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103326838
Transcription machinery [BR:pmum03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     103326838
  RNA polymerase III system
   RNA polymerase III
     103326838
  RNA polymerase I system
   RNA polymerase I
     103326838
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103326838
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 103326838
NCBI-ProteinID: XP_008227310
LinkDB
Position
LG3:18455451..18458370
AA seq 144 aa
MVDRLFEDIFQILRLNPDGKKFDKVTRIEAKSETCEMFMHLDVNSEVYPMREGEKFSMAL
TSTINLDGTPDTGYFTQGNRKTLADEYEYVMQGKLFKISEGSKRDPKAEVNASFGGLLMM
LKGEASQFKNFELDQRMFLLIRKL
NT seq 435 nt   +upstreamnt  +downstreamnt
atggttgatcgtctgttcgaggatatatttcagattctgcgactgaacccagatggcaaa
aagtttgataaagttactcgaatcgaagcaaagagtgagacttgcgagatgttcatgcac
ctagatgtgaattcagaggtatatcccatgagggaaggtgagaaattctcaatggctcta
acttctacaatcaatttggatggaacacctgatactggctatttcactcagggcaatcgc
aagacgttggccgatgaatatgaatacgtcatgcaagggaagcttttcaaaatttcagaa
ggttctaaacgtgatcccaaagcggaggtaaatgcttcatttggtggccttttgatgatg
ctgaagggggaagcctctcaattcaagaactttgaacttgatcagaggatgtttctcctc
ataaggaagctatga

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