KEGG   Prunus mume (Japanese apricot): 103326851
Entry
103326851         CDS       T03196                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmum04121]
    103326851
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103326851
Enzymes [BR:pmum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103326851
Ubiquitin system [BR:pmum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103326851
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    103326851
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_3 zf-RING_5 zf-C3HC4 zf-RING_2 zf-C3HC4_2 DEAD zf-RING_UBOX ResIII Prok-RING_4 DEAD_2 zf-rbx1 zf-ANAPC11 zf-Nse zf-RING_6
Other DBs
NCBI-GeneID: 103326851
NCBI-ProteinID: XP_008227324
LinkDB
Position
LG3:complement(18646398..18652256)
AA seq 859 aa
MEDEDPVKLYMNLDNWQGPPTEPDEFRPSSEDYQSLSSSSDTRLLGFVNADIVGIQWYLG
TISGQEMVVLVREPLNFQDSNAIKVFNTTTVQVGHIERRVAAALAPLIDSSLIAVEGIVL
NTRAEGNGPKITCQVNIFSRFEDFTSVKSAISQSGLHLVVKEKKAERAGKSVDEIFKLLD
ENANKNGVLKALEPPAEVIKTELFVHQKEGLGWLIHRERSDELPPFWEEKGGSFVNALTH
FSTHKRPEPLRGGIFADEMGLGKTLTLLSLIAFDKYGSGIVDVSMLDDNEMGEDKGLSSS
VGKKGKRGRPSEKSMGMRKQHKTENTIVEGKCVSANDKSSHEISRTTLIVCPSSVLSTWQ
TQFEEHTRLNWCKYYGLRTKDAEELKKYDIVLTTYGVLSSEYPSRTSPVDQIEWWRVILD
EAQMIKNENAQQSEAVTKLKAKRRWAVTGTPIQNGSFDLFSLMAFLRFEPFSIKSCWQSL
VQRPLADGNPKGLSRLQVLMATISLRRTKDKLRIGLPSKTVDICYVELSAEERKLYDEME
EEAKSVVRNYTSADSVMRKYSTVLSIILQLRQICTDSALCPSGLKSLHIEDVTKNPELLK
KMLELLQDGEDLDCPICIDPPIDVVITCCAHIFCKACILKSFVRTKSRSCPLCRGPVSES
ELYSAPQTPSESGNMVSSKTTMSSKGSFLLNLLIASRDQNPLMKSVVFSQFPKMLIYLEE
HLEAAGFKTLRLDSSMGADRRARVIRDFRVTGQDVPTILLASLRASGMGINLTAASRVYL
LDPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIARNSIEERILKLQEKKKKLENESLGRRT
TAKGRRDINFDDLQVLIPL
NT seq 2580 nt   +upstreamnt  +downstreamnt
atggaagacgaagatcccgtgaagctctatatgaacctcgataactggcaaggccctcca
acagagccagatgaatttcgtccctcctcggaagactatcagtctctctcttcttcctcc
gatacccgcttgcttggtttcgtcaacgccgacatagttggaattcaatggtatttaggc
accatcagtggccaagaaatggtggttcttgtccgcgaaccccttaattttcaagattcc
aacgccatcaaagtcttcaataccaccaccgttcaagtgggtcacattgaacgccgcgtg
gcggccgcactagcgccgttgattgactcgagtttgattgcggtggagggcattgttctc
aatacgcgagctgagggcaatgggcccaagattacttgccaagttaacatcttttcaaga
tttgaagattttacctctgtgaagtcggcaatttcgcaatctgggttacatttggtggtc
aaggagaagaaggcggagagggcaggcaagagcgtggatgagattttcaagttgctggat
gagaatgcgaacaagaatggtgttttgaaagctttggaacccccagcagaagtgatcaaa
acggagctttttgtgcaccaaaaagaagggttgggatggttgattcatagagagaggtct
gatgagctgcctcctttttgggaagagaaaggtgggtcttttgtgaatgcgttgacccat
ttcagcacccataagcgaccggagcctctaagaggtgggattttcgcggacgagatggga
ttgggtaagaccttaactttgctttctttgattgcgtttgataaatatggtagtggcatt
gttgatgtaagcatgctagatgataacgaaatgggtgaggataaggggttgtcttcttct
gttggtaagaagggcaagagaggtagaccaagtgaaaaaagcatgggcatgcgaaaacaa
cataaaactgagaataccattgtggaaggcaaatgtgtgagtgcaaatgataagtcttcg
catgagatcagtcggacgacattaattgtgtgcccttcttctgtactttcaacttggcaa
acacagtttgaagaacacactaggttgaattggtgcaagtattatggcctacggactaaa
gatgctgaggagcttaagaagtatgatatagtgttgactacatacggtgttttgtctagt
gaatatccttccagaacatcccctgtagaccagattgagtggtggcgggtgattttggat
gaggcacagatgattaagaatgagaatgctcaacaaagtgaagctgtcactaagttgaag
gctaagagaaggtgggctgttacgggaacaccaatccagaatggctcttttgatttgttt
tctttgatggctttcttgcggtttgagcctttttcaattaagagctgctggcaaagcttg
gtgcagcgcccacttgctgatggcaacccaaaggggctctcacggctgcaggttttaatg
gcaaccatctctttgcgaagaacaaaggacaagttacggattggattgccatctaaaact
gtagacatttgttacgtggaactctctgctgaagaacgtaaactgtatgatgagatggaa
gaagaagcaaagagtgttgtgcggaattacactagtgctgatagtgtaatgcgcaaatat
tctactgttcttagcataatcttacaacttcgccagatctgtactgattcggccttgtgc
ccttctggtctcaaatcacttcatattgaagatgtaaccaagaacccagagctgctgaaa
aaaatgcttgagttgctgcaagatggtgaagatttggactgtccgatttgcattgatcca
ccaattgatgttgtgatcacttgttgtgctcacattttttgcaaagcttgtattctgaaa
agctttgtgcgcacaaaaagtcgcagctgccccctttgtcggggtcctgtatcagagtct
gaactgtactcagcccctcaaacaccttctgaaagtggcaacatggtatcctctaaaaca
accatgtcttcaaaaggatcttttctgttgaatcttctcattgcatcaagggatcaaaac
ccactgatgaaatcagtagtgttttcccaatttccaaagatgctgatatatcttgaagag
cacctagaagcagctgggtttaagactttgcgcttagatagctctatgggtgcagataga
agggctcgagtaatcagagactttagggtcacgggacaagatgtgcccacaattttgctt
gcaagtcttagggcttcaggaatgggtataaacctcacagctgcaagtagagtgtatttg
ttggacccatggtggaaccctgcagttgaggaacaggcaatggatcgtgttcaccgtatt
gggcagaaggaggatgtgaagattgtcaggttgattgctcgaaacagcattgaagagagg
attttaaagttgcaggagaaaaagaagaaacttgaaaatgaatctttgggaaggaggacc
accgcaaagggtcgaagggacataaattttgatgatcttcaggttctcattcccttgtga

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