Prunus mume (Japanese apricot): 103326935
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Entry
103326935 CDS
T03196
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG1 isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103326935
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103326935
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103326935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_5
Prok-RING_4
Sina_RING
DUF1140
zf-C2H2_ZFAND2
Motif
Other DBs
NCBI-GeneID:
103326935
NCBI-ProteinID:
XP_008227408
UniProt:
A0ABM0NNF9
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Position
LG3:20323719..20329171
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AA seq
395 aa
AA seq
DB search
MGNGESTYTDGSHDDSLHELPSHAGTSMDSSHQPKQQSAYIADNFNSLDQVISSLREAGL
ESSNLILGIDFTKSNEWTGKYSFHRKSLHAVGSTPNPYEQAISIIGRTLSPFDEDNIIPC
FGFGDASTHDQCVFSFYPEGRYCHGFEEALARYREIVPLLKLSGPTSFAPIIDAAIDIVE
KSNGQYHVLVIIADGQVTRSPDTPPGRFSQQEQATVNSIVAASQYPLSIILVGVGDGPWD
AMQKFDDNIPQRSFDNFQFVNFTKIMSENTDISKKEAAFALAALMEIPYQYRATQSLHFV
NHEPVGGPRTRPLPPPREVITHDNAVKSIPQITNVQKVEPTAPVAPVEPVCPICLTNPKD
MAFGCGHTTCKDCGLSLHSCPLCREPISTRLRLYT
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggggaatggggaatctacatatactgatggttctcatgatgattctcttcatgaacta
ccttcccatgcagggacttcaatggattctagtcatcaaccaaagcaacaatccgcatac
atagccgacaattttaactctttggatcaggttatttcatcattgagagaagctggcctt
gaatcatcaaatttaatacttggtatcgacttcacaaagagcaatgaatggacaggaaaa
tattcattccataggaaaagccttcatgcagttggtagcacgcctaatccttacgagcaa
gcaatctctataattggccgtactttgtctcctttcgatgaagataatataataccttgt
tttggatttggcgatgcatcaacacatgatcaatgcgtgttcagtttttatcctgagggc
cgatattgtcacggtttcgaggaagctcttgcacgatatagggagattgttccgttatta
aagttatcaggtcctacctcatttgccccaataattgatgcggcaattgacattgttgaa
aaaagcaatgggcaataccacgttcttgtcattattgcagacggacaggttaccaggagc
cctgatactcctcctggaagattcagtcagcaagaacaagcaactgtaaattccattgtt
gctgctagtcaatatcctctctcaattatcttggttggagttggagatggaccatgggat
gcaatgcagaaatttgacgataacattcctcagcgctcatttgacaacttccagtttgtc
aacttcaccaaaatcatgtcagagaacacagatatatcaaagaaggaagccgcctttgca
cttgctgccctcatggaaattccatatcagtacagagccacccaaagtcttcattttgtc
aatcatgaaccagtaggtggtcctcgtacaaggccacttccacctccacgtgaagtgatt
actcatgataatgcagttaaatcaatcccacaaattacaaacgtgcagaaagttgagcca
acagctcctgtggctcctgtggaaccagtctgtcccatttgcctgacaaatccaaaggat
atggctttcggatgtggtcatacaacatgcaaggattgtgggctgagtcttcattcatgc
cctttgtgtcgagaacccatatcaacacgcctgagactatatacttga
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