KEGG   Prunus mume (Japanese apricot): 103326942
Entry
103326942         CDS       T03196                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2
  KO
K12195  charged multivesicular body protein 6
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03250  Viral life cycle - HIV-1
pmum04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103326942
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103326942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmum04131]
    103326942
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmum04147]
    103326942
Membrane trafficking [BR:pmum04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    103326942
Exosome [BR:pmum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103326942
  Exosomal proteins of other body fluids (saliva and urine)
   103326942
SSDB
Motif
Pfam: Snf7 TINF2_N CesT_Tir_1 EF-hand_STIM1 Phage_RB18_ORF43
Other DBs
NCBI-GeneID: 103326942
NCBI-ProteinID: XP_008227419
UniProt: A0ABM0NNH0
LinkDB
Position
LG3:20519226..20523600
AA seq 221 aa
MGNLFVKKPKITEVDRAILSLKTQRRKLAQYQQQLEAVIEAEKQAARDLIREKKKERALL
ALKKKKAQEDLLKQVDTWVINVEQQLLDIELTSKQQAVFESLKAGNNAIKAIQSEINLED
VQKLMDDTDEAKAYQDEMNAILGEKLSAEDEEDILAEFENLEAQITVQDLPKVPASVVSP
QEDEKLDLPDVPIKAPDAPDAITYDTEVSSKKKVMEEPLVA
NT seq 666 nt   +upstreamnt  +downstreamnt
atggggaatttattcgtgaagaagcccaagatcaccgaggtcgatcgagctattctctct
ctcaagactcagagacgcaagcttgctcagtaccaacaacagcttgaagctgtaattgaa
gccgaaaagcaagctgcaagagatttgattcgcgaaaagaaaaaggaaagagctttgtta
gcattaaagaagaaaaaagcacaagaagacttattgaagcaagtggatacctgggttatc
aatgttgagcaacagttgctagatattgaactgacaagcaagcagcaagctgtatttgag
agtttgaaggctggtaataatgcgattaaagccatacaaagtgagatcaaccttgaggat
gttcaaaagctaatggatgatactgatgaagctaaagcttaccaagatgaaatgaatgca
atcttaggggagaaattatcagcagaagatgaagaggatattttggcagaatttgagaat
ttggaagctcagatcactgttcaagatctgcccaaagttcctgcttctgtggtgtctcct
caagaagatgagaagttggaccttcccgatgtaccaatcaaagcaccagatgcacctgat
gcaatcacatatgataccgaagtttcctctaagaaaaaagttatggaagaaccattggtg
gcttga

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